SNPs of unigene RU23869
               1      -     51
RU23869        --> CTAATTGTTTGGGTTGGGTATTGTAGGTACGTCCCCTATTGTATTGCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ............................................atgcAT
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> CTAATTGTTTGGGTTGGGTATTGTAGGTACGTCCCCTATTGTATTGCTAT
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               51     -    101
RU23869        --> TGGGAAACATGTATGGACCTTCTTCGAAACCAGCATTTTTGAGCAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- TGGGAAACATGTATGGACCTTCTTCGAAACCAGCATTTTTGAGCAAGTTC
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> TGGGAAACATGTATGGACCTTCTTCGAAACCAGCATTTTTGAGCAAGTTC
ET0028615      --> ............................ACCAGCATTTTTGAGCAAGTTC
ET0099676      --> ..............................CAGCATTTTTGAGCAAGTTC
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               101    -    151
RU23869        --> TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0052455      <-- ............CGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0028615      --> TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0099676      --> TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0062501      --> TTGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0077498      --> .TGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
ET0077935      --> .TGTTGGTTGCTCGAGGAGGATACAAAGTTCGGATGGCAATTGAATCGAT
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               151    -    201
RU23869        --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0052455      <-- GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0028615      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0099676      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0062501      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0077498      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
ET0077935      --> GAGAGGACCGCAAGCAGGGTCTTCCTCCACTCCGGGGTTATGCAAAACAA
CT0052081      --> ...........................CACTCCGGGGTTATGCAAAACAA
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               201    -    251
RU23869        --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAA...............
ET0052455      <-- GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> GCTCAATCTCTGGAAAATCA..............................
ET0028615      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
ET0099676      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
ET0062501      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
ET0077498      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
ET0077935      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATCCCCA
CT0052081      --> GCTCAATCTCTGGAAAATCAGCTTGGAATGCCCAAGCATATGAATACCCA
ET0141354      --> ...............acaCAGCTTGGAATGCCCAAGCATATGAATCCCCA
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               251    -    301
RU23869        --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
ET0097238      <-- ......................CTGTCTGAATTGGTAGCACACCAGAGTC
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGG-AGCACACCAGAGTC
ET0099676      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGG-AGCACACCAGAGTC
ET0062501      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
ET0077498      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
ET0077935      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
CT0052081      --> ACCCAATTAGACTAGCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
ET0141354      --> -CCCA-TT-G-CT-GCTATACACTGTCTGAATTGGTAGCACACCAGAGTC
CT0066404      --> .................cttgttcttgtaatTTGGTAGCACACCAGAGTC
ET0108000      --> .......................................ACACCAGAGTC
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               301    -    351
RU23869        --> TGGTGCCACAGAGATGTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- TGG...............................................
ET0097238      <-- TGGTGCCACAGAGATGTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
CT0027811      <-- ......................CGCTCCTCTTTGAGCACAAGTCCTGGCT
CT0036940      <-- ......................CGCTCCTCTT-GAGCACAAGTCCTGGCT
CT0037264      <-- .............................CTT-GAGCACAAGTCCTGGCT
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> TGG...............................................
ET0099676      --> TGGTGCC...........................................
ET0062501      --> TGGTGCCACAGAGATGT.................................
ET0077498      --> TGGTGCCACAGAGATGTTCAAACGCTCC......................
ET0077935      --> TGGTGCCACAGAGATGTTCAA.............................
CT0052081      --> TGGTGCCACAGAGATGTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
ET0141354      --> TGGTGCCACAGAGATGTTCAA.............................
CT0066404      --> TGGTGCCACAGAGATGTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
ET0108000      --> TGGTGCCACAGAGATGTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
ET0081167      --> ...........attgtTTCAAACGCTCCTCTT-GAGCACAAGTCCTGGCT
ET0142815      --> ..............................................GGCT
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               351    -    401
RU23869        --> GCACTAAA-TGTTATGGAGTAGTACAAACCCTTGGTCACTTTGATCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- GCACTAAA-TGTTATGGAGTAGTACAAACCCTTGGTCACTTTGATCCTCT
CT0027811      <-- GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
CT0036940      <-- GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
CT0037264      <-- GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
CT0138969      <-- ..................................................
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- ..................................................
ET0147372      <-- ..................................................
ET0147813      <-- ..................................................
CT0139278      <-- ..................................................
CT0133984      <-- ..................................................
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> GCACTAAA-TGTTATGGAGTAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0141354      --> ..................................................
CT0066404      --> GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0108000      --> GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0081167      --> GCACTAAA-TGTTATGGAGAAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0142815      --> GCACTAAAATGTTATGGAGTAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0064925      --> ..............TGGAGTAGTACAAACCCTTGGTCACTTTGATCCTCT
ET0110670      --> ...............................TTGGTCACTTTGATCCTCT
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               401    -    451
RU23869        --> GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
CT0027811      <-- GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
CT0036940      <-- GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
CT0037264      <-- GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
CT0138969      <-- .CTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0094137      <-- .CTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0094558      <-- ...TAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0144772      <-- .....................CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0147372      <-- ....................cctAAGCCTAACTGCATAGGCACCCTCAGG
ET0147813      <-- ...................cctaagGCCTAACTGCATAGGCACC-TCAGG
CT0139278      <-- ..........................CCTAACTGCATAGGCACCCTCAGG
CT0133984      <-- ...........................CTAACTGCATAGGCACCCTCAGG
ET0076376      <-- ..................................................
ET0092020      <-- ..................................................
CT0024362      <-- ..................................................
CT0106842      <-- ..................................................
ET0034347      <-- ..................................................
ET0125632      <-- ..................................................
CT0051975      <-- ..................................................
ET0005846      <-- ..................................................
ET0026683      <-- ..................................................
ET0029567      <-- ..................................................
ET0032219      <-- ..................................................
ET0032595      <-- ..................................................
ET0032675      <-- ..................................................
ET0034044      <-- ..................................................
ET0037641      <-- ..................................................
CT0047729      <-- ..................................................
CT0068329      <-- ..................................................
ET0023282      <-- ..................................................
ET0027596      <-- ..................................................
ET0027678      <-- ..................................................
ET0027772      <-- ..................................................
ET0029736      <-- ..................................................
ET0030245      <-- ..................................................
ET0037465      <-- ..................................................
ET0039290      <-- ..................................................
CT0061488      <-- ..................................................
CT0081027      <-- ..................................................
ET0023708      <-- ..................................................
ET0035574      <-- ..................................................
ET0057431      <-- ..................................................
ET0075452      <-- ..................................................
ET0086909      <-- ..................................................
ET0094402      <-- ..................................................
ET0094915      <-- ..................................................
ET0095198      <-- ..................................................
ET0113757      <-- ..................................................
ET0046164      <-- ..................................................
ET0047668      <-- ..................................................
ET0057027      <-- ..................................................
ET0106841      <-- ..................................................
ET0105433      <-- ..................................................
ET0141213      <-- ..................................................
CT0046780      <-- ..................................................
ET0053805      <-- ..................................................
ET0068112      <-- ..................................................
RH42BI14       <-- ..................................................
RH59CG54       <-- ..................................................
ET0111004      <-- ..................................................
ET0127358      <-- ..................................................
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> GCTTAATTG.........................................
ET0141354      --> ..................................................
CT0066404      --> GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0108000      --> GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0081167      --> GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
ET0142815      --> GCTTAATTGAGGCCTCATTTTCCAAGCCTAACTGCATAGGCACCCTCAGG
ET0064925      --> GCTTAATTGAGGCCTCATTTTCCAAGCCTAACTGCATAGGCACCCTCAGG
ET0110670      --> GCTTAATTGAGGCCTCATTT-CCAAGCCTAACTGCATAGGCACCCTCAGG
CT0093492      --> .......................AAGCCTAACTGCATAGGCACCCTCAGG
ET0017044      --> .......................................GCACCCTCAGG
CT0056425      --> ..................................................
CT0045790      --> ..................................................
ET0126937      --> ..................................................
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               451    -    501
RU23869        --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- CACAACCAGCAAacat..................................
CT0027811      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0036940      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0037264      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0138969      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0094137      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0094558      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0144772      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0147372      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0147813      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0139278      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0133984      <-- CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0076376      <-- .......AGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0092020      <-- .........CAAAATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0024362      <-- ................TCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0106842      <-- ..................CCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0034347      <-- ..................CCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0125632      <-- ..........................TCTGGCCCGACTTGATGTACTCGA
CT0051975      <-- ...................................cCTTGATGTACTCGA
ET0005846      <-- ...................................cCTTGATGTACTCGA
ET0026683      <-- ...................................cCTTGATGTACTCGA
ET0029567      <-- ...................................cCTTGATGTACTCGA
ET0032219      <-- ...................................cCTTGATGTACTCGA
ET0032595      <-- ...................................cCTTGATGTACTCGA
ET0032675      <-- ...................................cCTTGATGTACTCGA
ET0034044      <-- ...................................cCTTGATGTACTCGA
ET0037641      <-- ...................................cCTTGATGTACTCGA
CT0047729      <-- .....................................TTGATGTACTCGA
CT0068329      <-- .....................................TTGATGTACTCGA
ET0023282      <-- .....................................TTGATGTACTCGA
ET0027596      <-- .....................................TTGATGTACTCGA
ET0027678      <-- .....................................TTGATGTACTCGA
ET0027772      <-- .....................................TTGATGTACTCGA
ET0029736      <-- .....................................TTGATGTACTCGA
ET0030245      <-- .....................................TTGATGTACTCGA
ET0037465      <-- .....................................TTGATGTACTCGA
ET0039290      <-- .......................................GATGTACTCGA
CT0061488      <-- .........................................TGTACTCGA
CT0081027      <-- .........................................TGTACTCGA
ET0023708      <-- .........................................TGTACTCGA
ET0035574      <-- .........................................TGTACTCGA
ET0057431      <-- .........................................TGTACTCGA
ET0075452      <-- .........................................TGTACTCGA
ET0086909      <-- .........................................TGTACTCGA
ET0094402      <-- .........................................TGTACTCGA
ET0094915      <-- .........................................TGTACTCGA
ET0095198      <-- .........................................TGTACTCGA
ET0113757      <-- .........................................TGTACTCGA
ET0046164      <-- ..........................................GTACTCGA
ET0047668      <-- ..........................................GTACTCGA
ET0057027      <-- ..........................................GTACTCGA
ET0106841      <-- ..........................................GTACTCGA
ET0105433      <-- ...........................................TACTCGA
ET0141213      <-- ...........................................TACTCGA
CT0046780      <-- ............................................ACTCGA
ET0053805      <-- ............................................ACTCGA
ET0068112      <-- ............................................ACTCGA
RH42BI14       <-- ............................................ACTCGA
RH59CG54       <-- ............................................ACTCGA
ET0111004      <-- .............................................CTCGA
ET0127358      <-- ...............................................CGA
ET0074013      <-- ..................................................
ET0106381      <-- ..................................................
ET0132247      <-- ..................................................
ET0061249      <-- ..................................................
ET0140735      <-- ..................................................
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> CACAACCA..........................................
ET0108000      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0081167      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0142815      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0064925      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0110670      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0093492      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
ET0017044      --> CACAACCAGCAACATGTCCCCTTGCTTCTGGCCCGACTTGATGTACTCGA
CT0056425      --> ............................TGGCCCGACTTGATGTACTCGA
CT0045790      --> ................................CCGACTTGATGTACTCGA
ET0126937      --> .....................................TTGATGTACTCGA
CT0085689      --> ..................................................
CT0048499      --> ..................................................
ET0009288      --> ..................................................
ET0120429      --> ..................................................
ET0105837      --> ..................................................
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               501    -    551
RU23869        --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0036940      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0037264      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0138969      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0094137      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0094558      <-- CAAACCC-GGAAAATTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0144772      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0147372      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0147813      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0139278      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0133984      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0076376      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0092020      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0024362      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0106842      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0034347      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0125632      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0051975      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0005846      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0026683      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0029567      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0032219      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0032595      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0032675      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0034044      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0037641      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0047729      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0068329      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0023282      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0027596      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0027678      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0027772      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0029736      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0030245      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0037465      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0039290      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0061488      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0081027      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0023708      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0035574      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0057431      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0075452      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0086909      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0094402      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0094915      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0095198      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0113757      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0046164      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0047668      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0057027      <-- CAAACCCCGGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0106841      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0105433      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0141213      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0046780      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0053805      <-- CAAACCCCGGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0068112      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
RH42BI14       <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
RH59CG54       <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0111004      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0127358      <-- CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0074013      <-- ....CCC-GGAAAATTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0106381      <-- ....CCC-GGAAAATTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0132247      <-- ..........AAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0061249      <-- ...................CACTTCGGTATGGCATAGCGGCCGATCACTT
ET0140735      <-- .................................ATAGCGGCCGATCACTT
CT0077282      <-- ..................................................
CT0052300      <-- ..................................................
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> CAAACCC-GGAAA-TTTCCCA-TTCGGTATGGC.................
ET0081167      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0142815      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0064925      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0110670      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0093492      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0017044      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0056425      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0045790      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
ET0126937      --> CAAACCC-GGAAA-TTTCCCACTTCGGTATGGCATAGCGGCCGATCACTT
CT0085689      --> .......................TCGGTATGGCATAGCGGCCGATCACTT
CT0048499      --> ..............................GGCATAGCGGCCGATCACTT
ET0009288      --> .......................................GCCGATCACTT
ET0120429      --> ..............................................ACTT
ET0105837      --> ................................................TT
ET0004991      --> ..................................................
CT0028093      --> ..................................................
CT0025258      --> ..................................................

               551    -    601
RU23869        --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- CTGTGCCCCT-GA.....................................
CT0036940      <-- CTGTGCCCCT-GA.....................................
CT0037264      <-- CTGTGCCCCT........................................
CT0138969      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0094137      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0094558      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0144772      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0147372      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0147813      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0139278      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0133984      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0076376      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0092020      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0024362      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0106842      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0034347      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0125632      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0051975      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0005846      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0026683      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0029567      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0032219      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0032595      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0032675      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0034044      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0037641      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0047729      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0068329      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0023282      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0027596      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0027678      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0027772      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0029736      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0030245      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0037465      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0039290      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0061488      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0081027      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0023708      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0035574      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0057431      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0075452      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0086909      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0094402      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0094915      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0095198      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0113757      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0046164      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0047668      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0057027      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0106841      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0105433      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0141213      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0046780      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0053805      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0068112      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
RH42BI14       <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
RH59CG54       <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0111004      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0127358      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0074013      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0106381      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0132247      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0061249      <-- CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0140735      <-- CTGTGCCCCTCGATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0077282      <-- ...........................GGGGCTAGCTCGAAATTCCCATT
CT0052300      <-- ................................TAGCTCGAAATTCCCATT
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> CTGTG.............................................
ET0142815      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGta.........
ET0064925      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0110670      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0093492      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0017044      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0056425      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0045790      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0126937      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0085689      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
CT0048499      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0009288      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0120429      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0105837      --> CTGTGCCCCT-GATGTCCGAGGGCTTTGGGGCTAGCTCGAAATTCCCATT
ET0004991      --> ................................TAGCTCGAAATTCCCATT
CT0028093      --> .............................................CCATT
CT0025258      --> ..................................................

               601    -    651
RU23869        --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0094137      <-- TT-C-AAGA-TAACCATCGATGAGGGGACATA..................
ET0094558      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATA..................
ET0144772      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0147372      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0147813      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0139278      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0133984      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0076376      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0092020      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0024362      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0106842      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0034347      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0125632      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0051975      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0005846      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0026683      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0029567      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0032219      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0032595      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0032675      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0034044      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0037641      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0047729      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0068329      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0023282      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0027596      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0027678      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0027772      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0029736      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0030245      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0037465      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0039290      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0061488      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0081027      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0023708      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0035574      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0057431      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0075452      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0086909      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0094402      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0094915      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0095198      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0113757      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0046164      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0047668      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0057027      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0106841      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0105433      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0141213      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0046780      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0053805      <-- TTTC-AAGA-TAACCATCGATGAGGGGACATAGATAGGTGGCAAGTGGAG
ET0068112      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
RH42BI14       <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
RH59CG54       <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0111004      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0127358      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0074013      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0106381      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0132247      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0061249      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0140735      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0077282      <-- TT-CTAAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0052300      <-- TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> TT-C-AAGACTAACCATCGta.............................
ET0110670      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAG.................
CT0093492      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0017044      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATA..................
CT0056425      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0045790      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0126937      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0085689      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0048499      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0009288      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0120429      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0105837      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
ET0004991      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0028093      --> TT-C-AAGA-TAACCATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG
CT0025258      --> ...............ATCGATGAGGG-ACATAGATAGGTGGCAAGTGGAG

               651    -    701
RU23869        --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................  Ethylene
ET0052455      <-- ..................................................  Ethylene
ET0097238      <-- ..................................................  Ethylene
CT0027811      <-- ..................................................  Control
CT0036940      <-- ..................................................  Control
CT0037264      <-- ..................................................  Control
CT0138969      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0094137      <-- ..................................................  Ethylene
ET0094558      <-- ..................................................  Ethylene
ET0144772      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0147372      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0147813      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0139278      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0133984      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCCCT-CTCATATTT-G  Control
ET0076376      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0092020      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0024362      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0106842      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0034347      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0125632      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0051975      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0005846      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0026683      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0029567      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0032219      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0032595      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0032675      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0034044      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0037641      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0047729      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0068329      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0023282      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0027596      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0027678      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0027772      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0029736      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0030245      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0037465      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0039290      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0061488      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0081027      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0023708      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0035574      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0057431      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0075452      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0086909      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0094402      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0094915      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0095198      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0113757      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0046164      <-- CAGAGTAGCACAGCCAACTAATTAAGGTCTAACCCC-TTCTCATATTT-G  Ethylene
ET0047668      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0057027      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0106841      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0105433      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0141213      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTTTG  Ethylene
CT0046780      <-- CAGAGTAGC.........................................  Control
ET0053805      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0068112      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
RH42BI14       <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-C-CTCATATTT-G  WaterDS
RH59CG54       <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-C-CTCATATTT-G  WaterDS
ET0111004      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0127358      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0074013      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0106381      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0132247      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0061249      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0140735      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0077282      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0052300      <-- CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0061879      --> ..................................................  Ethylene
ET0028615      --> ..................................................  Ethylene
ET0099676      --> ..................................................  Ethylene
ET0062501      --> ..................................................  Ethylene
ET0077498      --> ..................................................  Ethylene
ET0077935      --> ..................................................  Ethylene
CT0052081      --> ..................................................  Control
ET0141354      --> ..................................................  Ethylene
CT0066404      --> ..................................................  Control
ET0108000      --> ..................................................  Ethylene
ET0081167      --> ..................................................  Ethylene
ET0142815      --> ..................................................  Ethylene
ET0064925      --> ..................................................  Ethylene
ET0110670      --> ..................................................  Ethylene
CT0093492      --> CAGAGTAGCACAGCCAAa................................  Control
ET0017044      --> ..................................................  Ethylene
CT0056425      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0045790      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0126937      --> CAGAGTAGTACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0085689      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
CT0048499      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control
ET0009288      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0120429      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0105837      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
ET0004991      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Ethylene
CT0028093      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T--TCATATTT-G  Control
CT0025258      --> CAGAGTAGCACAGCCAAC-AAT-AAGG-C-AACCCC-T-CTCATATTT-G  Control

               701    -    751
RU23869        --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..................................................
ET0052455      <-- ..................................................
ET0097238      <-- ..................................................
CT0027811      <-- ..................................................
CT0036940      <-- ..................................................
CT0037264      <-- ..................................................
CT0138969      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTG.............
ET0094137      <-- ..................................................
ET0094558      <-- ..................................................
ET0144772      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0147372      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0147813      <-- -AAATATTTGAAACTCTTATCTTAAAAAGGTTT-CTGTT-CT........
CT0139278      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0133984      <-- -AAATATTTGAAACTCTTATCTTAAAAAGGTTT-CTGTT-CTTTT-CTTT
ET0076376      <-- -AAATATTTGAAACTCTT................................
ET0092020      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTT..................
CT0024362      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTG.............
CT0106842      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT...........
ET0034347      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT.....
ET0125632      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTG.............
CT0051975      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0005846      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0026683      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0029567      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0032219      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0032595      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0032675      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0034044      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0037641      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
CT0047729      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
CT0068329      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0023282      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0027596      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0027678      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0027772      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0029736      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0030245      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0037465      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0039290      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
CT0061488      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0081027      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0023708      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0035574      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0057431      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0075452      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0086909      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0094402      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0094915      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0095198      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0113757      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0046164      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0047668      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0057027      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0106841      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0105433      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0141213      <-- AAAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0046780      <-- ..................................................
ET0053805      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTTTCTGTT-CTTTT-CTTT
ET0068112      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
RH42BI14       <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
RH59CG54       <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0111004      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0127358      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0074013      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0106381      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0132247      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTTTCTTTTTCTTT
ET0061249      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CT........
ET0140735      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0077282      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0052300      <-- -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0061879      --> ..................................................
ET0028615      --> ..................................................
ET0099676      --> ..................................................
ET0062501      --> ..................................................
ET0077498      --> ..................................................
ET0077935      --> ..................................................
CT0052081      --> ..................................................
ET0141354      --> ..................................................
CT0066404      --> ..................................................
ET0108000      --> ..................................................
ET0081167      --> ..................................................
ET0142815      --> ..................................................
ET0064925      --> ..................................................
ET0110670      --> ..................................................
CT0093492      --> ..................................................
ET0017044      --> ..................................................
CT0056425      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0045790      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0126937      --> -AAATATTTGAAACTCTTA...............................
CT0085689      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTG.............
CT0048499      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0009288      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0120429      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0105837      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
ET0004991      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0028093      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT
CT0025258      --> -AAATATTTGAAACTCTTATCTTAAAA-GGTTT-CTGTT-CTTTT-CTTT

               751    -    801
RU23869        --> GATGTGGAA-GATGGGGTcgtgcttcac..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0000890      <-- ..............................
ET0052455      <-- ..............................
ET0097238      <-- ..............................
CT0027811      <-- ..............................
CT0036940      <-- ..............................
CT0037264      <-- ..............................
CT0138969      <-- ..............................
ET0094137      <-- ..............................
ET0094558      <-- ..............................
ET0144772      <-- ..............................
ET0147372      <-- ..............................
ET0147813      <-- ..............................
CT0139278      <-- GATGTGGtaaga..................
CT0133984      <-- GATGTGGAAag...................
ET0076376      <-- ..............................
ET0092020      <-- ..............................
CT0024362      <-- ..............................
CT0106842      <-- ..............................
ET0034347      <-- ..............................
ET0125632      <-- ..............................
CT0051975      <-- ..............................
ET0005846      <-- ..............................
ET0026683      <-- ..............................
ET0029567      <-- ..............................
ET0032219      <-- ..............................
ET0032595      <-- ..............................
ET0032675      <-- ..............................
ET0034044      <-- ..............................
ET0037641      <-- ..............................
CT0047729      <-- ..............................
CT0068329      <-- GATGTGGAA-G...................
ET0023282      <-- ..............................
ET0027596      <-- ..............................
ET0027678      <-- ..............................
ET0027772      <-- ..............................
ET0029736      <-- ..............................
ET0030245      <-- ..............................
ET0037465      <-- ..............................
ET0039290      <-- ..............................
CT0061488      <-- GATGTGGAA-GATGG...............
CT0081027      <-- GATGTGGAA-GAT.................
ET0023708      <-- GATGTGGAA-GATGGGG.............
ET0035574      <-- GATGTGGAA-GATGGGG.............
ET0057431      <-- GATGTGGAA-GATGGGG.............
ET0075452      <-- GATGTGGAA-GATGGGG.............
ET0086909      <-- GATGTGGAA-GATGGGG.............
ET0094402      <-- GATGTGGAA-GATGGGG.............
ET0094915      <-- GATGTGGAA-GATGGGG.............
ET0095198      <-- GATGTGGAA-GATGGGG.............
ET0113757      <-- GATGTGGAA-GATGG...............
ET0046164      <-- GATGTGGAA-GATGGGG.............
ET0047668      <-- GATGTGGAA-GATGGGG.............
ET0057027      <-- GATGTGGAA-GATGGGG.............
ET0106841      <-- GATGTGGAA-GATGGG..............
ET0105433      <-- GATGTGGAA-GATGGGGTg...........
ET0141213      <-- GATGTGGAA-GATGGGGg............
CT0046780      <-- ..............................
ET0053805      <-- GATGTGGAA-GATGGGG.............
ET0068112      <-- GATGTGGAA-GATGGGGTg...........
RH42BI14       <-- GATGTGGAA-GATGGGG.............
RH59CG54       <-- GATGTGGAA-GATGGGG.............
ET0111004      <-- GATGTGGAA-GATGGGGTgaa.........
ET0127358      <-- GATGTGGAA-GATGGGGTgaa.........
ET0074013      <-- GATGTGGAA-GATGGGGTgaatgcttc...
ET0106381      <-- GATGTGGAAAGATGGGGTgaaatgcttaac
ET0132247      <-- GATGTGGAA-GATGG...............
ET0061249      <-- ..............................
ET0140735      <-- GATGTGGAA-GATGGGGTgaa.........
CT0077282      <-- GATGTGGAA-G...................
CT0052300      <-- GATGTGGAA-G...................
ET0061879      --> ..............................
ET0028615      --> ..............................
ET0099676      --> ..............................
ET0062501      --> ..............................
ET0077498      --> ..............................
ET0077935      --> ..............................
CT0052081      --> ..............................
ET0141354      --> ..............................
CT0066404      --> ..............................
ET0108000      --> ..............................
ET0081167      --> ..............................
ET0142815      --> ..............................
ET0064925      --> ..............................
ET0110670      --> ..............................
CT0093492      --> ..............................
ET0017044      --> ..............................
CT0056425      --> G.............................
CT0045790      --> GATGTagg......................
ET0126937      --> ..............................
CT0085689      --> ..............................
CT0048499      --> GATGTGGAA-GATGGGGT............
ET0009288      --> GATGTGGAA-GAT.................
ET0120429      --> GATGTGGAA-GATGGG..............
ET0105837      --> GATGTGGAA-GATGGGGTgaa.........
ET0004991      --> GATGTGGAA-GATGGGGTgaa.........
CT0028093      --> GATGTGGAA-GATGGc..............
CT0025258      --> GATGTGGAA-GATGGGGT............