SNPs of unigene RU23900
               1      -     51
RU23900        --> ACCTGATCGAGAGAGAGAGAGCCGCATCACCGTTTCTCTTCTGCAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ACCTGATCGAGAGAGAGAGAGCCGCATCACCGTTTCTCTTCTGCAAAAGA
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................GAGCCGCATCACCGTTTCTCTTCTGCAAAAGA
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               51     -    101
RU23900        --> CGAGACCCAGATCGACCTACTCCTCTTCTTCGATTCGCTTGGAGCTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- CGAGACCCAGATCGACCTACTCCTCTTCTTCGATTCGCTTGGAGCTTCAA
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> CGAGACCCAGATCGACCTACTCCTCTTCTTCGATTCGCTTGGAGCTTCAA
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               101    -    151
RU23900        --> TTTCTAGCCGCGGAGGGTACGTTTGTTCTGGCTTCATCGTTCCTCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- TTTCTAGCCGCGGAGGGTACGTTTGTTCTGGCTTCATCGTTCCTCTTCTG
RH06C154       <-- ..................ACGTTTGTTCTGGCTTCATCGTTCCTCTTCTG
RH11E81        <-- ..................ACGTTTGTTCTGGCTTCATCGTTCCTCTTCTG
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> TTTCTAGCCGCGGAGGGTACGTTTGTTCTGGCTTCATCGTTCCTCTTCTG
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               151    -    201
RU23900        --> CTCTTCTTCTCAAGTCGGAACCTTGGAGCTTGGAGATTGAATTTCTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- CTCTTCTTCTCAAGTCGGAACCTTGGAGCTTGGAGATTGAATTTCTAGCC
RH11E81        <-- CTCTTCTTCTCAAGTCGGAACCTTGGAGCTTGGAGATTGAATTTCTAGCC
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> CTCTTCTTCTCAAGTCGGAACCTTGGAGCTTGGAGATTGAATTTCTAGCC
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               201    -    251
RU23900        --> GCTTCAGCCTAGCAAGCAAAGAAAGCAAACCCAGATATCCGAAAATGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................  Control
RH06C154       <-- GCTTCAGCCTAGCAAGCAAAGAAAGCAAACCCAGATATCCGAAAATGGGT  WaterDS
RH11E81        <-- GCTTCAGCCTAGCAAGCAAAGAAAGCAAACCCAGATATCCGAAAATGGGT  WaterDS
ET0069376      <-- ........................aCAAACCCAGATATCCCAAAATGGGT  Ethylene
ET0070775      <-- ........................aCAAACCCAGATATCCCAAAATGGGT  Ethylene
ET0074164      <-- ........................aCAAACCCAGATATCCCAAAATGGGT  Ethylene
ET0074137      <-- ...........................AACCCAGATATCCCAAAATGGGT  Ethylene
ET0096154      <-- ...........................AACCCAGATATCCCAAAATGGGT  Ethylene
ET0101253      <-- ...........................AACCCAGATATCCCAAAATGGGT  Ethylene
RH50BT66       <-- ..................................................  WaterDS
CT0074075      <-- ..................................................  Control
CT0006216      <-- ..................................................  Control
ET0089171      <-- ..................................................  Ethylene
CT0109243      <-- ..................................................  Control
ET0098038      <-- ..................................................  Ethylene
ET0011261      <-- ..................................................  Ethylene
ET0147365      --> GCTTCAGCCTAGCAAGCAAAGAAAGCAAACCCAGATAT............  Ethylene
ET0057663      --> ..................................................  Ethylene
ET0074636      --> ..................................................  Ethylene
ET0091590      --> ..................................................  Ethylene
ET0087709      --> ..................................................  Ethylene
ET0091267      --> ..................................................  Ethylene
ET0099625      --> ..................................................  Ethylene
ET0132938      --> ..................................................  Ethylene
ET0067600      --> ..................................................  Ethylene
ET0118991      --> ..................................................  Ethylene
CT0093207      --> ..................................................  Control

               251    -    301
RU23900        --> TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
RH11E81        <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0069376      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0070775      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0074164      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0074137      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0096154      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
ET0101253      <-- TATGCACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
RH50BT66       <-- ....CACAGCTAGTTATTGGCCCTGCAGGCAGTGGCAAGTCCACTTATTG
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               301    -    351
RU23900        --> CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- CTCCAGTTTGCACCAACACTGTTTAG-ATAATGGAAGGACTCTACATATT
RH11E81        <-- CTCCAGTTTGCACCAACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0069376      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0070775      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0074164      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0074137      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0096154      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
ET0101253      <-- CTCCAGTTTGCACCGACACTGTTTAG-ATAATGGAAGGACTCTACATATT
RH50BT66       <-- CTCCAGTTTGCACCAACACTGTTTAG-ATAATGGAAGGACTCTACATATT
CT0074075      <-- ......ttgtCACCAACACTGTTTAGTATAATGGAAGGACTCTACATATT
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               351    -    401
RU23900        --> GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- GTTAACTTAGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
RH11E81        <-- GTTAACTTAGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0069376      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0070775      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0074164      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0074137      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0096154      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
ET0101253      <-- GTTAACTTGGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
RH50BT66       <-- GTTAACTTAGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
CT0074075      <-- GTTAACTTAGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTGGA
CT0006216      <-- ........................CATTTTGACTACCCTGTGGCTTTGGA
ET0089171      <-- ........................CATTTTGACTACCCTGTGGCTTTGGA
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ...........................TTTGACTACCCTGTGGCTTTGGA
ET0074636      --> ...........................TTTGACTACCCTGTGGCTTTGGA
ET0091590      --> ...........................TTTGACTACCCTGTGGCTTTGGA
ET0087709      --> ............................TTGACTACCCTGTGGCTTTGGA
ET0091267      --> ............................TTGACTACCCTGTGGCTTTGGA
ET0099625      --> ............................TTGACTACCCTGTGGCTTTGGA
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               401    -    451
RU23900        --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
RH11E81        <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0069376      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0070775      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0074164      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0074137      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0096154      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0101253      <-- TATTAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
RH50BT66       <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
CT0074075      <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
CT0006216      <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0089171      <-- TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0074636      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0091590      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0087709      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0091267      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0099625      --> TATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0132938      --> .ATCAGGGAGCTTATTAACTTGGATGATGTTATGGAGGAACTTGGACTGG
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               451    -    501
RU23900        --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- G-T-CCC-AATGGTGGACTTATGT..........................
RH11E81        <-- G-T-CCC-AATGGTGGACTTATGT..........................
ET0069376      <-- G-T-CCC-AATGGTGGAC................................
ET0070775      <-- G-T-CCC-AATGGTGGAC................................
ET0074164      <-- G-T-CCC-AATGGTGGAC................................
ET0074137      <-- GGTCCCC-AATGGTGGAC................................
ET0096154      <-- G-T-CCCCAATGGTGGAC................................
ET0101253      <-- G-T-CCC-AATGGTGGAac...............................
RH50BT66       <-- G-T-CCC-AATGGTGGACTTATGT..........................
CT0074075      <-- G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
CT0006216      <-- G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAG.....
ET0089171      <-- G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
CT0109243      <-- ..T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0098038      <-- .............TGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0074636      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0091590      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0087709      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0091267      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0099625      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0132938      --> G-T-CCC-AATGGTGGACTTATGTACTGCATGGAACACCTTGAAGATAAT
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               501    -    551
RU23900        --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTAC..............
CT0006216      <-- ..................................................
ET0089171      <-- CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
CT0109243      <-- CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0098038      <-- CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0074636      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0091590      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0087709      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0091267      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0099625      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0132938      --> CTGGATGATTGGCTTGCAGAGGGATTGGAGGATTACCTGGATGATGACTA
ET0067600      --> .........................TGGAGGATTAC-TGGATGATGACTA
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               551    -    601
RU23900        --> CTTAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATGTGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- CATAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATG......
CT0109243      <-- CTTAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATGTGCCTA
ET0098038      <-- CTTAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATGTGCCTA
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0074636      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0091590      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0087709      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0091267      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0099625      --> CTTAGTTTTTGACTGCCCgtgtg...........................
ET0132938      --> CATAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATGTGCCTA
ET0067600      --> CTTAGTTTTTGACTGCCCAGGCCAAATAGAACTTTTTTCTCATGTGCCTA
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               601    -    651
RU23900        --> TGCTTCGGAACTTTGTGGACCATTTAAAGAGCAAGAGTTTCAACGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- TGCTTCGGAACTTTGTGGACCATTTAAAGAGCAAGA..............
ET0098038      <-- TGCTTCGGAACTTTGTGGACCATTTAAAGAGCAAGAGTTTCAACGTTTGT
ET0011261      <-- .....................................TTTCAACGTTTGT
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> TGCTTCGGAACTTTGTGGACCATTTAAAGAGCAAGAGTTTCAACGTTTG.
ET0067600      --> TGCTTCGGAACTTTGTGGACCATTTAAAGAGCAAGAGTTTCAACGTTTGT
ET0118991      --> ..................................................
CT0093207      --> ..................................................

               651    -    701
RU23900        --> GCCGTATACTTGCTTGATTCACAGTTCATGACCGATGTGACCAAGTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- GCCGTATACTTGCTCGATTCACAGTTCATGACCGATGTGACCAAGTTTAT
ET0011261      <-- GCCGTATACTTGCTTGATTCACAGTTCATGACCGATGTGACCAAGTTTAT
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> GCCGTATACTTGCTCGATTCACAGTTCATGACCGATGTGACCAAGTTTAT
ET0118991      --> .............................................TTTAT
CT0093207      --> ..................................................

               701    -    751
RU23900        --> CAGTGGGTGCATGGCATCTCTTTCTGCGATGGTTCAACTTGAATTACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- tc................................................
ET0011261      <-- CAGTGGGTGCATGGCATCTCTTTCTGCAATGGTTCAACTTGAATTACCGC
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> CAGTGGGTGCATGGCATCTCTTTCTGCAATGGTTCAACTTGAATTACCGC
ET0118991      --> CAGTGGGTGCATGGCATCTCTTTCTGCAATGGTTCAACTTGAATTACCGC
CT0093207      --> ..................................................

               751    -    801
RU23900        --> ATGTTAACATTCTCTCCAAAATGGACCTTGTGACGAACAAAAAGGATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ATGTTAACATTCTCTCCAAAATGGACCTTGTGACGAACAAAAAGGATATT
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ATGTTAACATTCT.....................................
ET0118991      --> ATGTTAACATTCTCTCCAAAATGGACCTTGTGACGAACAAAAAGGATATT
CT0093207      --> ..................................................

               801    -    851
RU23900        --> GAAGATTTCTTGAATCCAGAGCCCCAATTTTTGTTGTCAGAGTTGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- GAAGATTTCTTGAATCCAGAGCCCCAATTTTTGTTGTCAGAGTTGAACAA
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> GAAGATTTCTTGAATCCAGAGCCCCAATTTTTGTTGTCAGAGTTGAACAA
CT0093207      --> ........................CAATTTTTGTTGTCAGAGTTGAACAA

               851    -    901
RU23900        --> ACGCATGGCTCCTCAATTTGCAAAGCTTAACAAGTCTTTGATGGAACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ACGCATGGCTCCTCAATTTGCAAAagct......................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ACGCATGGCTCCTCAATTTGCAAAGCTTAACAAGTCTTTGATGGAACTGG
CT0093207      --> ACGCATGGCTCCTCAATTTGCAAAGCTTAACAAGTCTTTGATGGAACTGG

               901    -    951
RU23900        --> TTGATGATTATAGCATGGTG-AGTTTTGTGCCACTTGACTTGAGGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> TTGATGATTATAGCATGGTGTAGTTTTGTGCCta................
CT0093207      --> TTGATGATTATAGCATGGTG-AGTTTTGTGCCACTTGACTTGAGGAAGGA

               951    -   1001
RU23900        --> GAGCAGCATAAGATATGTATTGGCTCAAATTGATACCTCGATTCAGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> GAGCAGCATAAGATATGTATTGGCTCAAATTGATACCTCGATTCAGTTCG

               1001   -   1051
RU23900        --> GAGAAGATGCTAGATGTAGGTAAGGTTAAGGTTATTTTAGACTACCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- ..................................................
RH06C154       <-- ..................................................
RH11E81        <-- ..................................................
ET0069376      <-- ..................................................
ET0070775      <-- ..................................................
ET0074164      <-- ..................................................
ET0074137      <-- ..................................................
ET0096154      <-- ..................................................
ET0101253      <-- ..................................................
RH50BT66       <-- ..................................................
CT0074075      <-- ..................................................
CT0006216      <-- ..................................................
ET0089171      <-- ..................................................
CT0109243      <-- ..................................................
ET0098038      <-- ..................................................
ET0011261      <-- ..................................................
ET0147365      --> ..................................................
ET0057663      --> ..................................................
ET0074636      --> ..................................................
ET0091590      --> ..................................................
ET0087709      --> ..................................................
ET0091267      --> ..................................................
ET0099625      --> ..................................................
ET0132938      --> ..................................................
ET0067600      --> ..................................................
ET0118991      --> ..................................................
CT0093207      --> GAGAAGATGCTAGATGTAGGTAAGGTTAAGGTTATTTTAGACTACCGAAG

               1051   -   1101
RU23900        --> AAGTACTACCGAAAAGGAAAACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069694      <-- .........................
RH06C154       <-- .........................
RH11E81        <-- .........................
ET0069376      <-- .........................
ET0070775      <-- .........................
ET0074164      <-- .........................
ET0074137      <-- .........................
ET0096154      <-- .........................
ET0101253      <-- .........................
RH50BT66       <-- .........................
CT0074075      <-- .........................
CT0006216      <-- .........................
ET0089171      <-- .........................
CT0109243      <-- .........................
ET0098038      <-- .........................
ET0011261      <-- .........................
ET0147365      --> .........................
ET0057663      --> .........................
ET0074636      --> .........................
ET0091590      --> .........................
ET0087709      --> .........................
ET0091267      --> .........................
ET0099625      --> .........................
ET0132938      --> .........................
ET0067600      --> .........................
ET0118991      --> .........................
CT0093207      --> AAGTACTACCGAAAAGGAAAACCGA