1 - 51
RU24088 --> TTTTTTTTTGGAGAAGAAAATATAAGAATTGGTATTTCTCTGGTAATTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> TTTTTTTTTGGAGAAGAAAATATAAGAATTGGTATTTCTCTGGTAATTGT
CT0006794 --> .........GGAGAAGAAAATATAAGAATTGGTATTTCTCTGGTAATTGT
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
51 - 101
RU24088 --> ACAAAGCTTAAGGGCTTAATGAACAAGACGCAATAATTTTAACCCTAATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ACAAAGCTTAAGGGCTTAATGAACAAGACGCAATAATTTTAACCCTAATT
CT0006794 --> ACAAAGCTTAAGGGCTTAATGAACAAGACGCAATAATTTTAACCCTAATT
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
101 - 151
RU24088 --> TTGCAACTGGTAGTAACTTTATTTTTTTTTTTTTTTTTGATTAAGTAGGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ...........................TTTTTTTTTCTGATTAAGTAGGA
CT0129504 <-- ..............................TTTTTTTTGATTAAGTAGGA
CT0010722 <-- ...............................TTTTTCTGATTAAGTAGGA
CT0095090 <-- ....................................cTGATTAAGTAGGA
ET0006126 <-- ....................................cTGATTAAGTAGGA
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> TTGCAACTGGTAGTAACTTTATTTTTTTTTTTTTTTTTGATTAAGTAGGA
CT0006794 --> TTGCAACTGGTAGTAACTATTTTTTT........................
CT0069683 --> ............................TTTTTTTTCTGATTAAGTAGGA
ET0102455 --> .....................................TGATTAAGTAGGA
CT0058061 --> ......................................GATTAAGTAGGA
ET0019860 --> ......................................GATTAAGTAGGA
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
151 - 201
RU24088 --> ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGGCCATAAAG
CT0129504 <-- ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
CT0010722 <-- ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGGCCATAAAG
CT0095090 <-- ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGGCCATAAAG
ET0006126 <-- ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
CT0006794 --> ..................................................
CT0069683 --> ACAATGCATTAAAAAGGCAACAGCCCATAAAGGGTACAAGGGCCATAAAG
ET0102455 --> ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
CT0058061 --> ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
ET0019860 --> ACAATGCATTAAAA-GGCAACAGCCCATAAAGGGTACAAGGTCCATAAAG
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
201 - 251
RU24088 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- GACAAGCTCC........................................
CT0129504 <-- ..................................................
CT0010722 <-- GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
CT0095090 <-- GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
ET0006126 <-- GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
ET0147164 <-- ........CCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
CT0006794 --> ..................................................
CT0069683 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
ET0102455 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
CT0058061 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCT................
ET0019860 --> GACAAGCTCCCGAGGGAGTTACAAAAGCAGCCCTAAAACTAGGAAACGTA
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
251 - 301
RU24088 --> GAGTAACAAACCGAGGCCCAA-CACATAGGCCAACAACCGAGCCCAGTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- GAGTAACAAACCGAGGCCCAA-CACATAGGCCAAAAACCGAGCCCAGTCC
CT0095090 <-- GAGTAACAAACCGAGGCCCAA-CACATAGGCCAAAAACCGAGCCCAGTCC
ET0006126 <-- GAG...............................................
ET0147164 <-- GAGTAACAAACCGAGGCCCAA-CACATAGGCCAACAACCGAGCCCAGTCC
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> GAGTAACAAACCGAGGCCCAAACACATAGGCCAACAACCGAGCCCAGTCC
CT0006794 --> ..................................................
CT0069683 --> GAGTAACAAACCGAGGCCCAA-CACATAGGCCAAAAACCGAGCCCAGTCC
ET0102455 --> GAGTAACAAACCGAGGCCCAA-CACATAGGCCAACAACCGAGCCCAGTCC
CT0058061 --> ..................................................
ET0019860 --> GAGTAACAAACCGAGGCCCAA-CACATAGGCCAACAACCGAGCCCAGTCC
CT0018466 --> ................................................CC
CT0031883 --> ................................................CC
CT0042018 --> ................................................CC
CT0076705 --> ...............................................cct
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
301 - 351
RU24088 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ATGTCCACCAAGTCGAATCAAGAACCAAC.....................
CT0095090 <-- ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGAC.
ET0006126 <-- ..................................................
ET0147164 <-- ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ATGTCCACCA........................................
CT0006794 --> ..................................................
CT0069683 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
ET0102455 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0058061 --> ..................................................
ET0019860 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0018466 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0031883 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0042018 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
CT0076705 --> ATGTCCACCAAGTCGAATCAAGAACCAACCGCCGCCCAACTCTGCCGACA
ET0129928 --> ...............................................ACA
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
351 - 401
RU24088 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- .................................................. Control
CT0129504 <-- .................................................. Control
CT0010722 <-- .................................................. Control
CT0095090 <-- .................................................. Control
ET0006126 <-- .................................................. Ethylene
ET0147164 <-- GCAACGGAGAAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Ethylene
CT0050342 <-- .................................................. Control
CT0024781 <-- .................................................. Control
ET0049058 <-- .................................................. Ethylene
CT0004616 <-- .................................................. Control
CT0017081 <-- .................................................. Control
ET0053574 --> .................................................. Ethylene
CT0006794 --> .................................................. Control
CT0069683 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Control
ET0102455 --> GCAACGGAGAAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Ethylene
CT0058061 --> .................................................. Control
ET0019860 --> GCAACGGAGAAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Ethylene
CT0018466 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Control
CT0031883 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Control
CT0042018 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Control
CT0076705 --> GCAACGGAGCAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Control
ET0129928 --> GCAACGGAGAAAGGCAGCAACCAAAATCTGCAAGAATGATTCATTTGTCG Ethylene
CT0027118 --> .................................................. Control
ET0063943 --> .................................................. Ethylene
CT0081445 --> .................................................. Control
ET0102746 --> .................................................. Ethylene
401 - 451
RU24088 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> AAA...............................................
ET0102455 --> AAATCG............................................
CT0058061 --> ..................................................
ET0019860 --> AAATCG............................................
CT0018466 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
CT0031883 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
CT0042018 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
CT0076705 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
ET0129928 --> AAATCGAGCCTCCGAAGATCTCTGGTAAGCAAATCTAGATCTCCATCTCT
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
451 - 501
RU24088 --> GTACCCCCATAAACGTAAATCGACAGAAGGTCTCCCAGAAGGAGGTCGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- GTACCCCCATAAACGTAAATCGACAGAAGGTCTCCCAGAAGGAGGTCGAA
CT0050342 <-- ...........AACGTAAATCGACAGAAGGTCTCCCAGAAGGAGGTCGAA
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> GTACCCCCATAAACGTAAATCGA...........................
CT0031883 --> GTACCCCCATAAACGTAAATCGA...........................
CT0042018 --> GTACCCCCATAAACGTAAATCGA...........................
CT0076705 --> GTACCCCCATAAACGTA.................................
ET0129928 --> GTACCCCCATAAACGTAAATCGACAGAAGGTCTCCCAGAAGGAGGTCGAA
CT0027118 --> ........agAAACGTAAATCGACAGAAGGTCTCCCAGAAGGAGGTCGAA
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
501 - 551
RU24088 --> CCGAGAGGCTCAACCTGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTGCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- CCGAGAGGCTCAACCTGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTG..
CT0050342 <-- CCGAGAGGCTCAACCTGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTGCT
CT0024781 <-- ...............TGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTGCT
ET0049058 <-- ..................................................
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> CCGAGAGGCTCAACCTGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTGCT
CT0027118 --> CCGAGAAGCTCAACCTGAGTTCTCGTCGTCGAGGTTCCCGCCGAAGTGCT
ET0063943 --> .................................................T
CT0081445 --> ..................................................
ET0102746 --> ..................................................
551 - 601
RU24088 --> CCGTGAAAGAGACTCGGAACGAGCTAGCAGCCAAGTATTCTTCCTTGTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- CCGTGAAAGAGATTCGGAACGAGCTAGCAGCCAAATATTCTTCCTTGTCC
CT0024781 <-- CCGTGAAAGAGACTCGGAACGAGCTAGCAGCCAAGTATTCTTCCTTGTCC
ET0049058 <-- ......AAGAGACTCGGAACGAGCTAGCAGCCAAGTATTCTTCCTTGTCC
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> CCGTGAAAGAGATTCGGAA...............................
CT0027118 --> CCGTGAAAGAGACTCGGAACGAGCTAGCAGCCAAGTATTCTTCCTTGTCC
ET0063943 --> CCGTGAAAGAGACTCGGAACGAGCTAGCAGCCAAGTATTCTTCCTTGTCC
CT0081445 --> ................................AAGTATTCTTCCTTGTCC
ET0102746 --> .............................................gtTCC
601 - 651
RU24088 --> CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAAAGAGAAAGTTTGCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAAAGAGAAAGTTTGC..
CT0024781 <-- CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAA-GAGAAAGTTTGCAC
ET0049058 <-- CAAAAGGGGGGAAGGCTGCCAACGGAGA-GGAAAAAGAGAAAGTTTGCAC
CT0004616 <-- ..................................................
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAAAGAGAAAGTTTGCAC
ET0063943 --> CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAAAGAGAAAGTTTGCAC
CT0081445 --> CAAAAGGGGGAAAG-CTGCCAACGGAGAAGGAAAA-GAGAAAGTTTGCAC
ET0102746 --> CAAAAGGGGGGAAG-CTGCCAACGGAGAAGGAAAAAGAGAAAGTTTGCAC
651 - 701
RU24088 --> CC-ATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- CC-ATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
ET0049058 <-- CCCATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
CT0004616 <-- ...................................CAAACAAAGAGGAAA
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> CC-ATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
ET0063943 --> CC-ATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
CT0081445 --> CC-ATTCACCAAGAGAAACGATCTCACCAAGAAACCAAACAAAGAGGAAA
ET0102746 --> CC-ATTCACCAAGAGAAACGATCTCGCCAAGAAACCAAACAAAGAGGAAA
701 - 751
RU24088 --> A-GAAAAACAAA-GGTGAGGGAGGTGTAGGGATGACCATGGAAGGAGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- A-GAAAAACAAA-G....................................
ET0049058 <-- A-GAAAAACAAA-GGTGAGGGAGGTGTAGGGATGACCATGGAAGGAGAGC
CT0004616 <-- A-GAAAAACAAAAGGTGAGGGAGGTGTAGGGATGACCATGGAAGGAGAGC
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> A-GAAAAACAAA-GGTGAGGGAGGTGTAGGGATGACCATGGAAGG.....
ET0063943 --> A-G...............................................
CT0081445 --> A-GAAAAACAAA-GGTGAGGGAGGTGTAGGGATGACCATGGAAGGAGAGC
ET0102746 --> AAGAAAAACAAA-GGTGAGGGAGGTGTAGGGATGACCATGGAAGGAGAGC
751 - 801
RU24088 --> AGTAAGGATCTTGGCCACATTGTTGGAAGATTCAAACTGAATGGAAGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- AGTAAGGAT.........................................
CT0004616 <-- AGTAAGGATCTTGGCCACATTGTTGGAAGATTCAAACTGAATGGAAGAGC
CT0017081 <-- ..................................................
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> AGTAAGGATCTTGGCCACATTGTTGGAAGATTCAAACTGAATGGAAGAGC
ET0102746 --> AGTAAGGATCTTGGCCACATTGTTGGAAGATTCAAACTGAATGGAAGAGC
801 - 851
RU24088 --> TGAGCTAAAACCAGAGAA-CTAAAACACA-GG--AAAAA--GGGGAAAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- TGAGCTAAAACCAGAGAA-CTAAAACACA-GG--AAAAAACGGGAAAAGC
CT0017081 <-- ..AGCTAAAACCAGAGAA-CTAAAACACA-GG--AAAAA--GGGGAAAGC
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> TGAGCTAAAACCAGAGAA-CTAAAACACA-GGGAAAAAA-GGGGGAAAGC
ET0102746 --> TGAGCTAAAACCAGAGAAACTAAAACACAAGG--AAAAA-ACGGGAAAGC
851 - 901
RU24088 --> AGGGACAGAGCCCGGACAGAGGAGCCGCCCCCAACTCTTAAACCTTCGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- AGGGACAGAGCCCGGACAGAGGAGCCGCCCCCAACTCTCAAACCTTCGAT
CT0017081 <-- AGGGACAGAGCCCGGACAGAGGAGCCGCCCCCAACTCTTAAACCTTCGAT
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> AGGGACAGAGCCCGGA-AGAGG............................
ET0102746 --> AGGGACAGAGCCCGGA..................................
901 - 951
RU24088 --> CTGGATCCAGAGGGATCTAGATCTGAGCTAGAGAGGAGGGGGAGGGAAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................................................
CT0129504 <-- ..................................................
CT0010722 <-- ..................................................
CT0095090 <-- ..................................................
ET0006126 <-- ..................................................
ET0147164 <-- ..................................................
CT0050342 <-- ..................................................
CT0024781 <-- ..................................................
ET0049058 <-- ..................................................
CT0004616 <-- CTAGATCCAGAGGGATCTAGATCTGAGCTAGAGAGGAGGGGGAGGGAAAA
CT0017081 <-- CTGGATCCAGAGGGATCTAGATCTGAGCTAGAGAGGAGGGGGAGGGAAAA
ET0053574 --> ..................................................
CT0006794 --> ..................................................
CT0069683 --> ..................................................
ET0102455 --> ..................................................
CT0058061 --> ..................................................
ET0019860 --> ..................................................
CT0018466 --> ..................................................
CT0031883 --> ..................................................
CT0042018 --> ..................................................
CT0076705 --> ..................................................
ET0129928 --> ..................................................
CT0027118 --> ..................................................
ET0063943 --> ..................................................
CT0081445 --> ..................................................
ET0102746 --> ..................................................
951 - 1001
RU24088 --> CGGGTTTCAGATCTGTTC
~~~~~~~~~~~~~~~~~~
CT0014390 <-- ..................
CT0129504 <-- ..................
CT0010722 <-- ..................
CT0095090 <-- ..................
ET0006126 <-- ..................
ET0147164 <-- ..................
CT0050342 <-- ..................
CT0024781 <-- ..................
ET0049058 <-- ..................
CT0004616 <-- CGGGTTTC..........
CT0017081 <-- CGGGTTTCAGATCTGTTC
ET0053574 --> ..................
CT0006794 --> ..................
CT0069683 --> ..................
ET0102455 --> ..................
CT0058061 --> ..................
ET0019860 --> ..................
CT0018466 --> ..................
CT0031883 --> ..................
CT0042018 --> ..................
CT0076705 --> ..................
ET0129928 --> ..................
CT0027118 --> ..................
ET0063943 --> ..................
CT0081445 --> ..................
ET0102746 --> ..................
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