SNPs of unigene RU24982
               1      -     51
RU24982        --> TGCTGGATTTGCCGGAGACCAAGAGCCGCCGCCGCCGCCAGAGGATCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- TGCTGGATTTGCCGGAGACCAAGAGCCGCCGCCGCCGCCAGAGGATCAAC
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               51     -    101
RU24982        --> CTCCACCGGATCACGCTGCCTCCTCCAAGTCTCACAAGCTTTCCGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- CTCCACCGGATCACGCTGCCTCCTCCAAGTCTCACAAGCTTTCCGATGAA
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               101    -    151
RU24982        --> GCCACTTCCAAGATTTTGAATCAGGTGGAGTATTATTTCAGTGATCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- GCCACTTCCAAGATTTTGAATCAGGTGGAGTATTATTTCAGTGATCTGAA
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               151    -    201
RU24982        --> CTTAGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGACCCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- CTTAGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGACCCTGAAG
CT0042833      <-- .................ATCTTATGAGGTTCATAAACAAAGACCCTGAAG
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               201    -    251
RU24982        --> GATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- GAT...............................................
CT0042833      <-- GATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTC
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               251    -    301
RU24982        --> GTAAGTAGTCATTCCCAGCTTGCAACTGTTATTGCGGAACTCCTCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- GTAAGTAGTCATTCCCAGCTTGCAACTGTTATTGCGGAACTCCTCAAAGC
ET0035294      <-- ............TCCCAGCTTGCAACTGT-ATTGCGGAACTCCTCAAAGC
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               301    -    351
RU24982        --> TTGTAGTACATGAAGATGGGAAGAAGGTCAGACGTCAGCATCCCCTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- TTGTAGTACA........................................
ET0035294      <-- TTGTAGTACATGAAGATGGGAAGAAGGTCAGACGTCAGCATCCCCTGACT
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> .............................AGACGTCAGCATCCCCTGACT
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               351    -    401
RU24982        --> CAATCAGATATGGAAGAGTTGCAATCTCGCATTGTTGTTGCTGAAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- CAATCAGATATGGAAGAGTTGCAATCTCGCATTGTTGTTGCTGAAAATTT
CT0119755      <-- .........................................TGAAAATTT
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> CAATCAGATATGGAAGAGTTGCAATCTCGCATTGTTGTTGCTGAAAATTT
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               401    -    451
RU24982        --> GCCTGAGGATCATTGCCACCAAAACCTCATGAAGATTTTCTCTGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- GCCTGAGGATCATTGCCACCA.............................
CT0119755      <-- GCCTGAGGATCATTGCCACCAAAACCTCATGAAGATTTTCTCTGCTGCTG
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> GCCTGAGGATCATTGCCACCAAAACCTCATGAAGATTTTCTCTGCTGCTG
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               451    -    501
RU24982        --> GGAGTGTGAAGACAATTCGTACCTGCCAGCCGCAAA-CCTCAAATAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- GGAGTGTGAAGACAATTCGTACCTGCCAGCCGCAAA-CCTCAAATAGTAA
ET0057029      <-- ............CAATTCGTACCTGCCAGCCGCAAAACCTCAAATAGTAA
RH54BU45       <-- ....................ACCTGCCAGCCGCAAA-CCTCAAATAGTAA
CT0106243      <-- ..................................................
ET0084921      --> GGAGTGTGAAGACAATTCGTACCTGCCAGCCGCAAA-CCTCAAATAGTAA
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               501    -    551
RU24982        --> TTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- TTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
ET0057029      <-- TTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
RH54BU45       <-- TTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
CT0106243      <-- ..................................................
ET0084921      --> TTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCta.......
CT0061853      --> .........AGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
ET0073452      --> .............TCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTA
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               551    -    601
RU24982        --> ACAAGTTGCATGCATTTGTGGAATATGAATCCCCTGAGCTGGCAGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................  Ethylene
CT0042833      <-- ..................................................  Control
ET0035294      <-- ..................................................  Ethylene
CT0119755      <-- ACAAGTTGCATGCTTTTGTGGAATATGAATCCCC................  Control
ET0057029      <-- ACAAGTTGCATGCTTTTGTGGAATATGAATCCCCTGAGCTGGCAGAGAAA  Ethylene
RH54BU45       <-- ACAAGTTGCATGCTTTTGTGGAATATGAATCCCCTGAGCTGGCAGAGAAA  WaterDS
CT0106243      <-- ..............TTTGTGGAATATGAATCCCCTGAGCTGGCGGAGAAA  Control
ET0084921      --> ..................................................  Ethylene
CT0061853      --> ACAAGTTGCATGCATTTGTGGAATATGAATCCCCTGAGCTGGCGGAGAAA  Control
ET0073452      --> ACAAGTTGCATGCTTTTGTGGAATATGAATCCCCTGAGCTGGCAGAGAAA  Ethylene
ET0020554      --> ................................................AA  Ethylene
CT0115288      --> ..................................................  Control
ET0084034      --> ..................................................  Ethylene
CT0135540      --> ..................................................  Control
CT0135904      --> ..................................................  Control
CT0137900      --> ..................................................  Control
ET0042451      --> ..................................................  Ethylene
ET0015187      --> ..................................................  Ethylene
ET0048581      --> ..................................................  Ethylene
ET0042197      --> ..................................................  Ethylene
ET0043883      --> ..................................................  Ethylene
ET0045589      --> ..................................................  Ethylene
ET0045828      --> ..................................................  Ethylene
ET0046492      --> ..................................................  Ethylene
ET0048256      --> ..................................................  Ethylene
ET0049897      --> ..................................................  Ethylene
ET0049961      --> ..................................................  Ethylene
ET0051544      --> ..................................................  Ethylene
ET0051577      --> ..................................................  Ethylene
ET0053703      --> ..................................................  Ethylene
ET0054113      --> ..................................................  Ethylene
ET0054569      --> ..................................................  Ethylene
ET0051821      --> ..................................................  Ethylene
ET0036593      --> ..................................................  Ethylene
ET0083209      --> ..................................................  Ethylene

               601    -    651
RU24982        --> GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
RH54BU45       <-- GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
CT0106243      <-- GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
ET0084921      --> ..................................................
CT0061853      --> GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
ET0073452      --> GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
ET0020554      --> GCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGT
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               651    -    701
RU24982        --> CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- CCGATTAATGCTTAAACG................................
RH54BU45       <-- CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
CT0106243      <-- CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
ET0084921      --> ..................................................
CT0061853      --> CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
ET0073452      --> CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
ET0020554      --> CCGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAA
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               701    -    751
RU24982        --> AGGGGCAGGA-TGGGGAACTGCAATTAGAGGAAGAGGATGCTTCTACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- AGGGGCAGGA-TGGGGAACTGCAATTAGAGGAAGAGGATGCTTCTACACA
CT0106243      <-- AGGGGCAGGA-TGGGGAACTGCAATTAGAGGAAGAGGATGCTTCTACACA
ET0084921      --> ..................................................
CT0061853      --> AGGGGCAGGA-TGGGGAACTGCAATTAGAGGAAGAGG.............
ET0073452      --> -GGGGCAGGAGTGGGGAACTGCAATTAGAGGAAGAGGATGCTTC......
ET0020554      --> AGGAGCAGG.........................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               751    -    801
RU24982        --> TGAACAAATACATCATGCCAATGAGAAACAATCAGAAGATTCTTCCCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- TGAACAAATACATCATGCCAATGAGAAACAATCAGAAGATTCTTCCCGGC
CT0106243      <-- TGAACAAATACATCATGCCAATGAGAAACAATCAGAAGATTCTTCCCGGC
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               801    -    851
RU24982        --> AATTTGATGCCCATTCACATGAACAAGGAGAGGAACATGGGAATGATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- AATTTGATGCCCATTCACATGAACAAGGAGAGGAACATGGGAATGATAAG
CT0106243      <-- AATTTGA...........................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> .......................CAAGGAGAGGAACATGGGAATGATAAG
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               851    -    901
RU24982        --> GAGGGCGGGCAAAGGAAAGCGCGTAATCGACAAGGAGGACGCGGCAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- GAGGGCGGGCAAAGGAAAGCGCGTAATCGACAAGGAGGACGCGGCAAGGG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> GAGGGCGGGCAAAGGAAAGCGCGTAATCGACAAGGAGGACGCGGCAAGGG
ET0084034      --> .......................TAATCGACAAGGAGGACGCGGCAAGGG
CT0135540      --> ...........................................GCAAGGG
CT0135904      --> ...........................................GCAAGGG
CT0137900      --> ...........................................GCAAGGG
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               901    -    951
RU24982        --> GCG-TGGGCGGGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- GCG-TGGGCGGGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> GCG-TGGGCGGGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
ET0084034      --> GCG-TGGGCGCGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
CT0135540      --> GCG-TGGGCGGGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
CT0135904      --> GCGGTGGGCGGGGGTCAAATACCACCACAATAATCGAAATACATGTTGGG
CT0137900      --> GCG-TGGGCGGGG-TC-AATACCACCACAATAATCGAAAT-CATGTTGGG
ET0042451      --> ......................................AT-CATGTTGGG
ET0015187      --> .....................................atcattgtTTGGG
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               951    -   1001
RU24982        --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGCATAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- -AC-TCCTCACAACAGTTCAATTGGTTGTAGTGAGCAGCCGGGCATAGGT
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
ET0084034      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGCATAGGT
CT0135540      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
CT0135904      --> GACGTCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
CT0137900      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
ET0042451      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
ET0015187      --> -AC-TCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGT
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               1001   -   1051
RU24982        --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
ET0084034      --> GTAGGTGTAG........................................
CT0135540      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
CT0135904      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
CT0137900      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
ET0042451      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
ET0015187      --> GTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAG
ET0048581      --> .............................TCGTATGCCAGATGGCACAAG
ET0042197      --> ..................................................
ET0043883      --> ..................................................
ET0045589      --> ..................................................
ET0045828      --> ..................................................
ET0046492      --> ..................................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> ..................................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> ..................................................

               1051   -   1101
RU24982        --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> AGGATTTGCAATGGG-TCGGGG............................
ET0084034      --> ..................................................
CT0135540      --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
CT0135904      --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
CT0137900      --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0042451      --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0015187      --> AGGATTTGCAATGGGGTCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0048581      --> AGGATTTGCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0042197      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0043883      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0045589      --> .......GCAATGGGGTCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0045828      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0046492      --> .......GCAATGGGGTCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0048256      --> .......GCAATGGGGTCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0049897      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0049961      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0051544      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0051577      --> .......GCAATGGGGTCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0053703      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0054113      --> .......GCAATGGG-TCGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0054569      --> .......GCAATGGG-TCGGGGGGAGGCCAGTTGCTGTTAATATTGCACA
ET0051821      --> ......gtCAATGGGGTCGGGG--AGGCCAGTTGCTGTTAATATTGCACA
ET0036593      --> .................CGGGGG-AGGCCAGTTGCTGTTAATATTGCACA
ET0083209      --> ..................................................

               1101   -   1151
RU24982        --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
CT0135904      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
CT0137900      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0042451      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0015187      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0048581      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0042197      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0043883      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0045589      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0045828      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0046492      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0048256      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0049897      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0049961      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTTTGTATCG
ET0051544      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0051577      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0053703      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0054113      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0054569      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0051821      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0036593      --> ATGAGTGCGCATTTCATAGAAGTTTTCTTGTTTTCTACATTTT-GTATCG
ET0083209      --> ..................................................

               1151   -   1201
RU24982        --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- GTGGCTGCATGAGGAACTATGTCCTCTCATCTGTTGTTTGATGGC-AAGG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
CT0135904      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
CT0137900      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0042451      --> GTGGCTGCATGAGGAACTATGTCT..........................
ET0015187      --> GTGGCTGCATGAGGAA..................................
ET0048581      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0042197      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0043883      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0045589      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0045828      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0046492      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0048256      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0049897      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGCTAAGG
ET0049961      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0051544      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0051577      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0053703      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0054113      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0054569      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0051821      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0036593      --> GTGGCTGCATGAGGAACTATGTCTTCTCGTCTGTTGTTTGATGGC-AAGG
ET0083209      --> ...................................GTTTGATGGC-AAGG

               1201   -   1251
RU24982        --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCACTTGTCAGTG
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> TTTTACAAGG........................................
CT0135904      --> TTTTACA...........................................
CT0137900      --> TTTTACAAGGG.......................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0042197      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0043883      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0045589      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0045828      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0046492      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0048256      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0049897      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0049961      --> TTTTACAAGGGCTGTCAATCCAACGTTAGTTTAAAGGTCATTTGTCAGTG
ET0051544      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0051577      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0053703      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0054113      --> TTTTACAAGGGCTGTCAATCCAAC..........................
ET0054569      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0051821      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG
ET0036593      --> TTTTACAAGGGCT.....................................
ET0083209      --> TTTTACAAGGGCTGTCAATCCAACGT-AGTTTAAAGGTCATTTGTCAGTG

               1251   -   1301
RU24982        --> TACGTTG-A-TTT-ATTTTTC-CAC-T-GGTTT-GTATTCA-GGTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- T.................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> TACGTTG-A-TTT-ATTTTTCTCAC-T-GGTTT.................
ET0042197      --> TACGTTG-A-TTTTATTTTTC-CA..........................
ET0043883      --> TACGTTG-A-TTTTATTTTTC-CAC-TTGGTTTTGTATTCAAGGTAAAGA
ET0045589      --> TACGTTG-A-TTTTATTTTTC-CAC-TTGGTTTTGTATTCAAGGTAAA..
ET0045828      --> TACGTTG-A-TTTTATTTTTCTCACTT-GGTTT-GTATTCA-GGTAAAGA
ET0046492      --> TACGTTG-A-TTTTATTTTTC-CAC-TTGGTTTTGTATTCA-GGTAAAGA
ET0048256      --> TACGT-G-A-TTT-ATTTTTC-CAC-T.......................
ET0049897      --> TACGTTG-A-TTTTATTTT...............................
ET0049961      --> TACGTTG-A-TTTTATTTT...............................
ET0051544      --> TACGTTG-A-TTTTATTTTTC-CAC-T-GGTTT-GTATTCA-GGTAAAGA
ET0051577      --> TACGTTGTATTTT-ATTTTTCTCACTT-GGTTT.................
ET0053703      --> TACGTTG-A-TTTTATTTTTCTCAC-T-GGTTT-GTATTCA-GGTAA...
ET0054113      --> ..................................................
ET0054569      --> TACGTTG-A-TTTTATTTTTCTCACTT-GGTTTTGTATTCA-GGTAAAG.
ET0051821      --> TACGTTG-A-TTTTATTTTTC-CAC-TTGGTTTTGTATTCAAGGTAAAG.
ET0036593      --> ..................................................
ET0083209      --> TACGTTG-A-TTT-ATTTTTCTCAC-T-GGTTT-GTATTCA-GGTAAAGA

               1301   -   1351
RU24982        --> TGATGCAGGAGCAAATGTGATTTTACCTTTCTTTCATTGTAGGTAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- ..................................................
CT0042833      <-- ..................................................
ET0035294      <-- ..................................................
CT0119755      <-- ..................................................
ET0057029      <-- ..................................................
RH54BU45       <-- ..................................................
CT0106243      <-- ..................................................
ET0084921      --> ..................................................
CT0061853      --> ..................................................
ET0073452      --> ..................................................
ET0020554      --> ..................................................
CT0115288      --> ..................................................
ET0084034      --> ..................................................
CT0135540      --> ..................................................
CT0135904      --> ..................................................
CT0137900      --> ..................................................
ET0042451      --> ..................................................
ET0015187      --> ..................................................
ET0048581      --> ..................................................
ET0042197      --> ..................................................
ET0043883      --> TGATGCAGGAG.......................................
ET0045589      --> ..................................................
ET0045828      --> TGATGCAGGA........................................
ET0046492      --> TGATGCAGGA........................................
ET0048256      --> ..................................................
ET0049897      --> ..................................................
ET0049961      --> ..................................................
ET0051544      --> TGATGCAGGAGC......................................
ET0051577      --> ..................................................
ET0053703      --> ..................................................
ET0054113      --> ..................................................
ET0054569      --> ..................................................
ET0051821      --> ..................................................
ET0036593      --> ..................................................
ET0083209      --> TGATGCAGGAGCAAATGTGATTTTACCTTTCTTTCATTGTAGGTAAAGAA

               1351   -   1401
RU24982        --> AAATGTGAGAAACCACAATCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~
ET0005233      <-- .......................
CT0042833      <-- .......................
ET0035294      <-- .......................
CT0119755      <-- .......................
ET0057029      <-- .......................
RH54BU45       <-- .......................
CT0106243      <-- .......................
ET0084921      --> .......................
CT0061853      --> .......................
ET0073452      --> .......................
ET0020554      --> .......................
CT0115288      --> .......................
ET0084034      --> .......................
CT0135540      --> .......................
CT0135904      --> .......................
CT0137900      --> .......................
ET0042451      --> .......................
ET0015187      --> .......................
ET0048581      --> .......................
ET0042197      --> .......................
ET0043883      --> .......................
ET0045589      --> .......................
ET0045828      --> .......................
ET0046492      --> .......................
ET0048256      --> .......................
ET0049897      --> .......................
ET0049961      --> .......................
ET0051544      --> .......................
ET0051577      --> .......................
ET0053703      --> .......................
ET0054113      --> .......................
ET0054569      --> .......................
ET0051821      --> .......................
ET0036593      --> .......................
ET0083209      --> AAATGTGAGAAACCACAATCACA