SNPs of unigene RU26626
               1      -     51
RU26626        --> TTGTTGGTTGTGAGAACAACAGTACAGATCCCGGGAGACTAGACGTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> TTGTTGGTTGTGAGAACAACAGTACAGATCCCGGGAGACTAGACGTAAGA
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               51     -    101
RU26626        --> AGCCAGACTCTCCGTACTTAGCTTCAGCTGTAGCAGGTTCTGGAAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> AGCCAGACTCTCCGTACTTAGCTTCAGCTGTAGCAGGTTCTGGAAAAGCT
ET0116506      --> .......................TCAGCTGTAGCAGGTTCTGGAAAAGCT
ET0120218      --> .......................TCAGCTGTAGCAGGTTCTGGAAAAGCT
ET0120274      --> .......................TCAGCTGTAGCAGGTTCTGGAAAAGCT
ET0122660      --> .......................TCAGCTGTAGCAGGTTCTGGAAAAGCT
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               101    -    151
RU26626        --> ACTTATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ACTAATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
ET0116506      --> ACTTATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
ET0120218      --> ACTTATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
ET0120274      --> ACTTATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
ET0122660      --> ACTTATTCTCCGTTGGTCCAGTGTACCAGCCATATGTGTCCAGTGAGAGT
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               151    -    201
RU26626        --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
ET0116506      --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
ET0120218      --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
ET0120274      --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
ET0122660      --> CCATTGGCATGTGAAGCTCAATTACAAGGAGTACTGGAGGGTGAAAGTTA
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               201    -    251
RU26626        --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAATATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ....................................TCTGGAATATTGTT
CT0052074      <-- ....................................TCTGGAATATTGTT
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAA.......
ET0116506      --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAATATTGTT
ET0120218      --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAATATTGTT
ET0120274      --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAATATTGTT
ET0122660      --> CAGTTACAAATTTCAATTACAGAATGAACTACACTCTCTGGAATATTGTT
CT0034916      --> ........................................GAATATTGTT
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               251    -    301
RU26626        --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
CT0052074      <-- GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0120218      --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0120274      --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0122660      --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
CT0034916      --> GTTCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0030611      --> ..TCAACATCCCAACTTCGATAATTTGACCAAGATTTTCAGCTTTAATTA
ET0034563      --> .............................CAAGATTTTCAGCTTTAATTA
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               301    -    351
RU26626        --> CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
CT0052074      <-- CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> CAAGGACTTGACTCCTTA................................
ET0120218      --> CAAGGACTTGACTCCTTA................................
ET0120274      --> CAAGGACTTGACTCCTTA................................
ET0122660      --> CAAGGACTTGACTCCTTA................................
CT0034916      --> CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
ET0030611      --> CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
ET0034563      --> CAAGGACTTGACTCCTTATGCTGGCTTGAATGATACTGCAATGTTGTGGG
CT0112017      --> .................................................c
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               351    -    401
RU26626        --> GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
CT0052074      <-- GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
ET0030611      --> GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
ET0034563      --> GAGTCAAGTTTTATAATGACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
CT0112017      --> aaagttttaataaatagaACTTGCTCATGCAAGCTGGTCCTCTTGGAAAT
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               401    -    451
RU26626        --> GCGCAGTCAGAGCTTCTATTTCGGAAAGATGCGTC-AACTTTT-ACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- GCGCAGTCAGAGCTTCTATTTCGGAAAG......................  Control
CT0052074      <-- GCGCAGTCAGAGCTTtcttattttcggtaaag..................  Control
ET0059113      <-- ..................................................  Ethylene
ET0060697      <-- ..................................................  Ethylene
ET0061573      <-- ..................................................  Ethylene
ET0081197      <-- ..................................................  Ethylene
ET0081661      <-- ..................................................  Ethylene
ET0081729      <-- ..................................................  Ethylene
ET0085097      <-- ..................................................  Ethylene
ET0086313      <-- ..................................................  Ethylene
ET0087035      <-- ..................................................  Ethylene
ET0089101      <-- ..................................................  Ethylene
ET0091505      <-- ..................................................  Ethylene
ET0097111      <-- ..................................................  Ethylene
ET0061797      <-- ..................................................  Ethylene
ET0077194      <-- ..................................................  Ethylene
ET0044036      <-- ..................................................  Ethylene
CT0095513      <-- ..................................................  Control
ET0143068      <-- ..................................................  Ethylene
ET0122423      <-- ..................................................  Ethylene
ET0122505      <-- ..................................................  Ethylene
CT0047873      <-- ..................................................  Control
CT0019144      <-- ..................................................  Control
CT0075770      <-- ..................................................  Control
ET0028148      <-- ..................................................  Ethylene
ET0103886      <-- ..................................................  Ethylene
ET0060696      <-- ..................................................  Ethylene
ET0080212      <-- ..................................................  Ethylene
CT0102712      --> ..................................................  Control
ET0116506      --> ..................................................  Ethylene
ET0120218      --> ..................................................  Ethylene
ET0120274      --> ..................................................  Ethylene
ET0122660      --> ..................................................  Ethylene
CT0034916      --> GCGCAGTCAGAGCTTCTATTT.............................  Control
ET0030611      --> GCGCAGTCAGAGCTTCTATTTCGGAAAGATGCGTC-AACTTTTTACTTT-  Ethylene
ET0034563      --> GCGCAGTCAGAGCTTCTATTTCGGAAAGATGCGTCTAACTTTTTACTTT-  Ethylene
CT0112017      --> GCGCAGTCAGAGCTTCTATTTCGGAAAGATGCGTC-AACTTTT-ACTTTT  Control
CT0020540      --> .....................CGGAAAGATGCGTC-AACTTTT-ACTTTT  Control
CT0089369      --> ..................................................  Control
ET0120398      --> ..................................................  Ethylene
CT0091831      --> ..................................................  Control
CT0065880      --> ..................................................  Control
CT0042783      --> ..................................................  Control
ET0128056      --> ..................................................  Ethylene
ET0134103      --> ..................................................  Ethylene
ET0018224      --> ..................................................  Ethylene
ET0089844      --> ..................................................  Ethylene
CT0100335      --> ..................................................  Control

               451    -    501
RU26626        --> GAAAAGGGATGGGCTTTCCCTCGAAGGATTTATTTTAACGGTGATAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0060697      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0061573      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0081197      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0081661      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0081729      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0085097      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0086313      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0087035      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0089101      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0091505      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0097111      <-- ..................CCTCGAAGGATTTATTTTAACGGTGATAACTG
ET0061797      <-- ...................CTCGAAGGATTTATTTTAACGGTGATAACTG
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> GAAAAGGGATGGGCTTTCCC..............................
ET0034563      --> GAAAAGG...........................................
CT0112017      --> GAAAAGGGATGGGCTTTCCCTCGAAGGATTTATTTTAACGGTGATAACTG
CT0020540      --> GAAAAGGGATGGGCTTTCCCTCGAAGGATTTATTTTAACGGTGATAACTG
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               501    -    551
RU26626        --> TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0060697      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0061573      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0081197      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0081661      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0081729      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0085097      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0086313      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0087035      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0089101      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0091505      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0097111      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0061797      <-- TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
CT0020540      --> TGTCATGCCACCTCCAGATGCTTATCCGTGGTTGCCAAATGCCAGTCCTA
CT0089369      --> ...........................................AGTCCCA
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               551    -    601
RU26626        --> GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0060697      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0061573      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0081197      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0081661      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0081729      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0085097      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0086313      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0087035      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0089101      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0091505      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0097111      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0061797      <-- GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
CT0020540      --> GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
CT0089369      --> GACCAACCATTTCCCTACTTAGTCCGGTTATAACTATCTTGGCATCTCTG
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               601    -    651
RU26626        --> GTATTCTTATTGTCTTATGCGTAGTGAGTGGCAAGACAATGTAAGCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- GTATTCTT..........................................
ET0060697      <-- GTATTCTT..........................................
ET0061573      <-- GTATTCTT..........................................
ET0081197      <-- GTATTCTT..........................................
ET0081661      <-- GTATTCTT..........................................
ET0081729      <-- GTATTCTT..........................................
ET0085097      <-- GTATTCTT..........................................
ET0086313      <-- GTATTCTT..........................................
ET0087035      <-- GTATTCTT..........................................
ET0089101      <-- GTATTCTT..........................................
ET0091505      <-- GTATTCTT..........................................
ET0097111      <-- GTATTCTT..........................................
ET0061797      <-- GTATTactt.........................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> GTATTCTT..........................................
CT0020540      --> GTATTCTTATTGTCTTATGCGTAGTGAGTGGCAAGACAATGTAAGCTCTG
CT0089369      --> GTATTCTTATTGTCTTATGCGTAGTGAGTGGCAAGACAATGTAAGCTCTG
ET0120398      --> ..............................GCAAGACAATGTAAGCTCTG
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               651    -    701
RU26626        --> TTTCTTTGAAAGAATTGTAGTGTTTCCATCGAGTTCAGTTTGCATTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- ..................................................
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> TTTCTTCGAAAGAATTGTAGTGTTTCCATCGtag................
CT0089369      --> TTTCTTTGAAAGAATTGTAGTGTTTCCATCGAGTTCAGTTTGCATTAAAG
ET0120398      --> TTTCTTCGAAAGAATTGTAGTGTTTCCATCGAGTTCAGTTTGCATTAAAG
CT0091831      --> ........AAAGAATTGTAGTGTTTCCATCGAGTTCAGTTTGCATTAAAG
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               701    -    751
RU26626        --> CTTATGGAAATCTGGTTGATGGGTTCAAAAGTGTTGGTGCTGTGACC-CT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- .......................TTCAAAAGTGTTGGTGCTGTGACC-CT
ET0044036      <-- ..................................................
CT0095513      <-- ..................................................
ET0143068      <-- ..................................................
ET0122423      <-- ..................................................
ET0122505      <-- ..................................................
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> CTTATGGAAATCTGGTTGATGGGTTCAAAAaaa.................
ET0120398      --> CTTGTGGAAATCTGGTTGATGGGTTCAAATGTGTTGGTGCTGTGACCTCT
CT0091831      --> CTTATGGAAATCTGGTTGATGGGTTCAAAAGTGTTGGTGCTGTGACC-CT
CT0065880      --> ......................GTTCAAATGTGTTGGTGCTGTGACCTCT
CT0042783      --> ............................AAGTGTTGGTGCTGTGACC-CT
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               751    -    801
RU26626        --> AGCAATACAAGTGGTTCAGGTGCACTCCGGTTTGACTGTCACTACAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- AGCAATACAAGTGGTTCAGGTGCACTCCGGTTTGACTGTCACTACAATAT
ET0044036      <-- ...................GTGCACTCCGGTTTGACTGTCACTACAATAT
CT0095513      <-- ....................gGCACTCCGGTTTGACTGTCACTACAATAT
ET0143068      <-- .....................GCACTCCGGTTTGACTGTCACTACAATAT
ET0122423      <-- ......................CACTCCGGTTTGACTGTCACTACAATAT
ET0122505      <-- ..............................TTTGACTGTCACTACAATAT
CT0047873      <-- ..................................................
CT0019144      <-- ..................................................
CT0075770      <-- ..................................................
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> AGCAATACAAGTGGTTCCGGTGCACTCCGGTTTGACTGTCACTACAATAT
CT0091831      --> AGCAATACAAGTGGTTCAGGTGCACTCCGGTTTGACTGTCACTACAA...
CT0065880      --> AGCAATACAAGTGGTTCCGGTGCACTCCGGTTTGACTGTCACTACAATAT
CT0042783      --> AGCAATACAAGTGGTTCAGGTGCACTCCGGTTTGACTGTCACT.......
ET0128056      --> ..................................................
ET0134103      --> ..................................................
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               801    -    851
RU26626        --> TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
ET0044036      <-- TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
CT0095513      <-- TCTGCCGTAATATCTGTTACAAGTATAAA-CAATTTATTCTTACTGCT-G
ET0143068      <-- TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
ET0122423      <-- TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
ET0122505      <-- TCTGCCTTAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
CT0047873      <-- ........AATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
CT0019144      <-- .....................CGTATAAA-CAATTTATTCTTACTGCT-G
CT0075770      <-- ................................ATTTATTCTTACTGCT-G
ET0028148      <-- ..................................................
ET0103886      <-- ..................................................
ET0060696      <-- ..................................................
ET0080212      <-- ..................................................
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> TCTGCCGTAATATCTGTTACAAGTATAAA-CAATTTATTCTTACTGCTTG
CT0091831      --> ..................................................
CT0065880      --> TCTGCCGTAATATCTGTTACAAGTATAAA-CAATTTATTCTTACTGCT-G
CT0042783      --> ..................................................
ET0128056      --> .......TAATATCTGTTACACGTATAAAACAATTTATTCTTACTGCT-G
ET0134103      --> .......TAATATCTGTTACACGTATAAA-CAATTTATTCTTACTGCT-G
ET0018224      --> ..................................................
ET0089844      --> ..................................................
CT0100335      --> ..................................................

               851    -    901
RU26626        --> TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0044036      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0095513      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0143068      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0122423      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0122505      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0047873      <-- TTTTTT-GTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0019144      <-- TTTTTT-GTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0075770      <-- TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0028148      <-- ........TTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0103886      <-- ............AATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0060696      <-- ..............................................ACAG
ET0080212      <-- ................................................AG
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> TTTTTTTGTTTAAATCCA-GCTGTTGTA......................
CT0091831      --> ..................................................
CT0065880      --> TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0042783      --> ..................................................
ET0128056      --> TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0134103      --> TTTTTTTGTTTAAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
ET0018224      --> ..TTTTTTTTTAAATCCAAGCTGTTGTATGATTATTTAGAATATCCACAG
ET0089844      --> ...........AAATCCA-GCTGTTGTATGATTATTTAGAATATCCACAG
CT0100335      --> ................................................AG

               901    -    951
RU26626        --> TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0044036      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0095513      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0143068      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0122423      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0122505      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0047873      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0019144      <-- TGAATATGTTCTTAGCACTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0075770      <-- TGAATATGTTCTTAGCACTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0028148      <-- TGAATATGTTCTTAGCACTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0103886      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0060696      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0080212      <-- TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> TGAATATGTTCTTAGCATTACAAGATATTTC...................
CT0042783      --> ..................................................
ET0128056      --> TGAATATGTTCTTAGCACTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0134103      --> TGAATATGTTCTTAGCACTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0018224      --> TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
ET0089844      --> TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA
CT0100335      --> TGAATATGTTCTTAGCATTACAAGATATTTCATGAAGAAATCAAAGTTTA

               951    -   1001
RU26626        --> TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- ..................................................
CT0052074      <-- ..................................................
ET0059113      <-- ..................................................
ET0060697      <-- ..................................................
ET0061573      <-- ..................................................
ET0081197      <-- ..................................................
ET0081661      <-- ..................................................
ET0081729      <-- ..................................................
ET0085097      <-- ..................................................
ET0086313      <-- ..................................................
ET0087035      <-- ..................................................
ET0089101      <-- ..................................................
ET0091505      <-- ..................................................
ET0097111      <-- ..................................................
ET0061797      <-- ..................................................
ET0077194      <-- TGTATG............................................
ET0044036      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
CT0095513      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0143068      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAAC.............
ET0122423      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0122505      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
CT0047873      <-- TGT...............................................
CT0019144      <-- TGT...............................................
CT0075770      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0028148      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0103886      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATGACAGTGATTAATTTA
ET0060696      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0080212      <-- TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
CT0102712      --> ..................................................
ET0116506      --> ..................................................
ET0120218      --> ..................................................
ET0120274      --> ..................................................
ET0122660      --> ..................................................
CT0034916      --> ..................................................
ET0030611      --> ..................................................
ET0034563      --> ..................................................
CT0112017      --> ..................................................
CT0020540      --> ..................................................
CT0089369      --> ..................................................
ET0120398      --> ..................................................
CT0091831      --> ..................................................
CT0065880      --> ..................................................
CT0042783      --> ..................................................
ET0128056      --> TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0134103      --> TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0018224      --> TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATTTA
ET0089844      --> TGTATGATTTTTGTTCAGTGAACCAGTGTTGTATAACAGTGATTAATT..
CT0100335      --> TGTATGATTTTTtgttac................................

               1001   -   1051
RU26626        --> TATATTTTCTTTTCATCTTGAGAAAAAAAATAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0008633      <-- .......................................
CT0052074      <-- .......................................
ET0059113      <-- .......................................
ET0060697      <-- .......................................
ET0061573      <-- .......................................
ET0081197      <-- .......................................
ET0081661      <-- .......................................
ET0081729      <-- .......................................
ET0085097      <-- .......................................
ET0086313      <-- .......................................
ET0087035      <-- .......................................
ET0089101      <-- .......................................
ET0091505      <-- .......................................
ET0097111      <-- .......................................
ET0061797      <-- .......................................
ET0077194      <-- .......................................
ET0044036      <-- TA.....................................
CT0095513      <-- TATATTTTCTTTTCATCTT-AGAAAAAAAA.........
ET0143068      <-- .......................................
ET0122423      <-- TATATTTTCTTTTCATCTTGAAAAAAAA...........
ET0122505      <-- TATATTTTCTTTTCATCTTGAGTTGGAAAGTAAAAAAAA
CT0047873      <-- .......................................
CT0019144      <-- .......................................
CT0075770      <-- TA.....................................
ET0028148      <-- TA.....................................
ET0103886      <-- TATATTTTCTTTTCATCTTGAGttgg.............
ET0060696      <-- TATATTTTCTTTTCATCTTGAGttggaaagt........
ET0080212      <-- TATATTTTCTTTTCATCTTGAGttaggaaagt.......
CT0102712      --> .......................................
ET0116506      --> .......................................
ET0120218      --> .......................................
ET0120274      --> .......................................
ET0122660      --> .......................................
CT0034916      --> .......................................
ET0030611      --> .......................................
ET0034563      --> .......................................
CT0112017      --> .......................................
CT0020540      --> .......................................
CT0089369      --> .......................................
ET0120398      --> .......................................
CT0091831      --> .......................................
CT0065880      --> .......................................
CT0042783      --> .......................................
ET0128056      --> TA.....................................
ET0134103      --> TA.....................................
ET0018224      --> TATATTTTCTTTTCATCTTGAGttggaaagta.......
ET0089844      --> .......................................
CT0100335      --> .......................................