Rose Transcriptome Database

               1      -     51
RU26660        --> GCTCTTACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0026991      <-- ...............CGAAAATAGATCAGATTAGATAGCTTAGTTATATG
ET0038823      <-- ..............cgtAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0053317      <-- ....................................AGCTTAGTTATATG
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> GCTCTTACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0008257      --> GCTCTTACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0005198      --> ......ACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0006461      --> ......ACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0008977      --> ......ACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
ET0054734      --> ......ACTAGAATTCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0012314      --> ..............TCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0054281      --> ..............TCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0071777      --> ..............TCGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0013286      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0023672      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0033300      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0042011      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0047769      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0051258      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0055695      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0061210      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0061612      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0063723      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0067961      --> ...............CGAAAAT-GATCAGATTAGATAGCTTAGTTATATG
CT0035347      --> ................................AGATAGCTTAGTTATATG
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               51     -    101
RU26660        --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0026991      <-- AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0038823      <-- AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0053317      <-- AGTACAACAGTAGCATACATATCAATTCATTGT.................
ET0000372      <-- .........ttttttTACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0086582      <-- ........tttttttTACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0008257      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0005198      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGT.....
ET0006461      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0008977      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
ET0054734      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0012314      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0054281      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0071777      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0013286      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0023672      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0033300      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0042011      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0047769      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0051258      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0055695      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0061210      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0061612      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0063723      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0067961      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
CT0035347      --> AGTACAACAGTAGCATACATATCAATTCATTGTACAGTTTTGTGTACAAT
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               101    -    151
RU26660        --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0026991      <-- CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0038823      <-- CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0053317      <-- ..................................................
ET0000372      <-- CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0086582      <-- CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0096011      <-- ...............................................AAT
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0008257      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0005198      --> ..................................................
ET0006461      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT.................
ET0008977      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
ET0054734      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT.................
CT0012314      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0054281      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0071777      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0013286      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0023672      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0033300      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0042011      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0047769      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0051258      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTTTAATTTCAACACTGAAT
CT0055695      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0061210      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0061612      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0063723      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0067961      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
CT0035347      --> CAATTTTATTTGCCATCTGTTGTTTCCTCCTTT-AATTTCAACACTGAAT
RH06A129       --> .........................CCTCCTTT-AATTTCAACACTGAAT
RH31AF17       --> .........................CCTCCTTT-AATTTCAACACTGAAT
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               151    -    201
RU26660        --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- TAAGAAATACA.......................................
ET0026991      <-- TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
ET0038823      <-- TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0053317      <-- ..................................................
ET0000372      <-- TAAGAAATACATTAACTGGC..............................
ET0086582      <-- TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0096011      <-- TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
ET0031626      <-- ...........................tCTCGGCTGTTGGGATACCAAGA
ET0040146      <-- ...........................tCTCGGCTGTTGGGATACCAAGA
ET0047759      <-- .............................TCGGCTGTTGGGATACCAAGA
CT0110770      <-- ..............................CGGCTGTTGGGATACCAAGA
ET0038217      <-- ....................................TTGGGATACCAAGA
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
ET0008257      --> TAAGAAATACATTAACT.................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
ET0054734      --> ..................................................
CT0012314      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0054281      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0071777      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0013286      --> TAAGAAATAC........................................
CT0023672      --> TAAGAAATA.........................................
CT0033300      --> TAAGAAATA.........................................
CT0042011      --> TAAGAAATA.........................................
CT0047769      --> TAAGAAATA.........................................
CT0051258      --> TAAGAAAT..........................................
CT0055695      --> TAAGAAATA.........................................
CT0061210      --> TAAGAAATA.........................................
CT0061612      --> TAAGAAATA.........................................
CT0063723      --> TAAGAAATA.........................................
CT0067961      --> TAAGAAATA.........................................
CT0035347      --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
RH06A129       --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
RH31AF17       --> TAAGAAATACATTAACTGGCTATACTTGCTCGGCTGTTGGGATACCAAGA
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               201    -    251
RU26660        --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0038823      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTT..
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0096011      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0031626      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0040146      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0047759      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0110770      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0038217      <-- GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0036162      <-- .......CAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
ET0061365      <-- .......CAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0137091      <-- .............AAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0028750      <-- ......................ttaATGCAAA-GATATACAGTTGGTTTT
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATA...........
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GAT..............
ET0054734      --> ..................................................
CT0012314      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACA.........
CT0054281      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACA.........
CT0071777      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACA.........
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATA...........
RH06A129       --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
RH31AF17       --> GAGTTACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0052865      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116217      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116303      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116699      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116770      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116916      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0117448      --> .....ACCAGACAAAATCACAATTTATGCAAAAGATATACAGTTGGTTTT
CT0117641      --> .....ACCAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0115317      --> ....acctAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0116137      --> ....acctAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0117149      --> ....acctAGACAAAATCACAATTTATGCAAA-GATATACAGTTGGTTTT
CT0044541      --> .............................................GTTTT
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               251    -    301
RU26660        --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- AT-GCAGG..........................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTT....
CT0096011      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0031626      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0040146      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0047759      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0110770      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0038217      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0036162      <-- ATTGCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0061365      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0137091      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0028750      <-- AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0076845      <-- ........AACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
ET0093063      <-- ........AACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0109559      <-- ......................cGATCCGGAGTTAGATCAGGTCTTGAAT
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
RH31AF17       --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0052865      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116217      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116303      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116699      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116770      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116916      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0117448      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0117641      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0115317      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0116137      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0117149      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0044541      --> AT-GCAGGAACCTTAAAACACCTGATCCGGAGTTAGATCAGGTCTTGAAT
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               301    -    351
RU26660        --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0031626      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0040146      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0047759      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0110770      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0038217      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0036162      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0061365      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0137091      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0028750      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0076845      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0093063      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0109559      <-- GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0051229      <-- ........ATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
ET0125267      <-- .......................CAATAGGACTACCTACTATGTGTTTCC
ET0127395      <-- .................................ACCTACTATGTGTTTCC
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
RH31AF17       --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0052865      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116217      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116303      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116699      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116770      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116916      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0117448      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0117641      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0115317      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0116137      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0117149      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0044541      --> GTTAATTTATATCCAGGTGTAAGCAATAGGACTACCTACTATGTGTTTCC
CT0130576      --> ................................................CC
CT0033828      --> ..................................................
ET0138174      --> ................................................aa
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               351    -    401
RU26660        --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0031626      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0040146      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0047759      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0110770      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0038217      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0036162      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0061365      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GC...................
CT0137091      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0028750      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0076845      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0093063      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0109559      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0051229      <-- CTACTCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0125267      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0127395      <-- C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGT............
RH31AF17       --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGT............
CT0052865      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTA...........
CT0116217      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0116303      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0116699      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0116770      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0116916      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0117448      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0117641      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0115317      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0116137      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0117149      --> CCA-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0044541      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0130576      --> C-A-TCAGACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
CT0033828      --> ........ACCATTCCAA-GCGACCAAA-GCTGGCTGTACCGGATGGCAA
ET0138174      --> tacaagaaccaATTCCAAAGCGACCAAAAGCTGGCTGTACCGGATGGCAA
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               401    -    451
RU26660        --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- AGA...............................................
ET0031626      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATG.................
ET0040146      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATG.................
ET0047759      <-- AGAGCTAGCAA-CTAAAAGTCCACACGTGTATG.................
CT0110770      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTC............
ET0038217      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATG.................
ET0036162      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATG.................
ET0061365      <-- ..................................................
CT0137091      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0028750      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0076845      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0093063      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0109559      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0051229      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0125267      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0127395      <-- AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0048979      <-- ....................................TCTTCTCATACGCA
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> AG................................................
CT0116303      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0116699      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0116770      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0116916      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0117448      --> AGAGCTAGCAAAC-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0117641      --> AG-GCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0115317      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0116137      --> AGAGCTAGCAAAC-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0117149      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0044541      --> AGAGCTAGCAA-C-A...................................
CT0130576      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
CT0033828      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0138174      --> AGAGCTAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0055640      --> .....TAGCAA-C-AAAAGTC-ACA-GTGTATGTCTTCTTCTCATACGCA
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               451    -    501
RU26660        --> TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
CT0028750      <-- TCACTGAAACTCAGTGAT................................
ET0076845      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0093063      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
CT0109559      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0051229      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0125267      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0127395      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0048979      <-- TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> TCA...............................................
CT0116699      --> TCA...............................................
CT0116770      --> TCA...............................................
CT0116916      --> TCA...............................................
CT0117448      --> TC................................................
CT0117641      --> TCA...............................................
CT0115317      --> TCA...............................................
CT0116137      --> TC................................................
CT0117149      --> TC................................................
CT0044541      --> ..................................................
CT0130576      --> TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
CT0033828      --> TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0138174      --> TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0055640      --> TCACTGAAACTCAGTGATTCTGGTTCTACGGACATCTTCACTGATCTGGT
ET0001058      --> ....................TGGTTCTACGGACATCTTCACTGATCTGGT
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               501    -    551
RU26660        --> CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- CAGTGAGGACATT.....................................
CT0028750      <-- ..................................................
ET0076845      <-- C.................................................
ET0093063      <-- C.................................................
CT0109559      <-- CAGTGAGGA.........................................
ET0051229      <-- CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCAC........
ET0125267      <-- CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0127395      <-- CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0048979      <-- CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0117079      <-- ...........................................TTGGTCA
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> CAGTGAGGACATTGAGACCTTGTATGTT......................
CT0033828      --> CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0138174      --> CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0055640      --> CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0001058      --> CAGTGAGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
ET0068686      --> .....AGGACATTGAGACCTTGTATGTTGCCGGGGCACCCACATTGGTCA
CT0016290      --> .................................................A
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               551    -    601
RU26660        --> G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- agaagtacctt.......................................
ET0127395      <-- G-AGTCCTTGTGTACTTTAAAG............................
ET0048979      <-- GTAGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
ET0117079      <-- G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
CT0037255      <-- ........TGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACC.........
ET0138174      --> G-AGTCCTTGTGTACTTTAAAGTGGTTGA.....................
ET0055640      --> G-AGT.............................................
ET0001058      --> G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
ET0068686      --> G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
CT0016290      --> G-AGTCCTTGTGTACTTTAAAGTGGTTGATGCACCAGTACCACCCCCTTG
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               601    -    651
RU26660        --> GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTTAAATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
ET0117079      <-- GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
CT0037255      <-- GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
CT0010236      <-- .CCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
RH14K153       <-- ..CTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTTAAATTTC
RH37AM72       <-- ..CTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTTAAATTTC
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> GCCTGAAGATGTATCTAGAGCA............................
ET0068686      --> GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
CT0016290      --> GCCTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
RH19S22        --> ..CTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
RH20T58        --> ..CTGAAGATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
CT0000848      --> .......GATGTATCTAGAGCAAGAGAAAAGGACGGGTAATTCAAATTTC
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               651    -    701
RU26660        --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- CGAGGCTGTATTTCTTGCTT..............................
ET0117079      <-- CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
CT0037255      <-- CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
CT0010236      <-- CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
RH14K153       <-- CAAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
RH37AM72       <-- CAAGGCTGTATTTCTTGCTTGAGCCACAGGTGAAGTCCTTCGTAGTGGTT
ET0084603      <-- .........ATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
CT0130523      <-- .....................................tgtgattGTGGTT
CT0133534      <-- .....................................tgtgattGTGGTT
ET0133693      <-- ....................................ctgtgattGTGGTT
CT0026210      <-- ................................................TT
ET0067635      <-- ................................................TT
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCT...........
CT0016290      --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTT..........
RH19S22        --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
RH20T58        --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTTCGTAGTGGTT
CT0000848      --> CGAGGCTGTATTTCTTGCTTGAGTCACAGGTGAAGTCCTT..........
CT0040156      --> ..................................tcctgtgattGTGGTT
ET0040733      --> ..........................tcgagcgtctctgtgattGTGGTT
ET0043563      --> ................................ttccttgtgattGTGGTC
ET0044987      --> ..........................tcgagcgtctctgtgattGTGGTT
ET0090308      --> ..................................tcctgtgattGTGGTT
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               701    -    751
RU26660        --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0037255      <-- TGCTTGATCTTAGAAGCGGAATAA..........................
CT0010236      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
RH14K153       <-- TGCTTGATCTGAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
RH37AM72       <-- TGCTTGATCTGAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0084603      <-- TGCTTGATCTGAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0130523      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0133534      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0133693      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0026210      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0067635      <-- TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0040400      <-- ..CTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
RH20T58        --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACGGAGGAAACTTAGGTA
CT0000848      --> ..................................................
CT0040156      --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0040733      --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0043563      --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0044987      --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
ET0090308      --> TGCTTGATCTTAGAAGCGGAATAATTCAAGGCACAGAGGAAACTTAGGTA
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               751    -    801
RU26660        --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGGGCTGCCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- GTCCTCA...........................................
CT0037255      <-- ..................................................
CT0010236      <-- GTCC..............................................
RH14K153       <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGGGCTGCCACTG
RH37AM72       <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGGGCTGCCACTG
ET0084603      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGGGCTGCCACTG
CT0130523      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0133534      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0133693      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0026210      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0067635      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0040400      <-- GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0015508      <-- .........................................CTGCCACTG
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
RH20T58        --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0000848      --> ..................................................
CT0040156      --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0040733      --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0043563      --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0044987      --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
ET0090308      --> GTCCTCAACAGCAAGATCGTAGACAAGGCCAGGGTCAAGAGCTGCCACTG
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               801    -    851
RU26660        --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- GGTCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
RH37AM72       <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0084603      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0130523      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0133534      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0133693      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0026210      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0067635      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0040400      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0015508      <-- GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
RH20T58        --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0000848      --> ..................................................
CT0040156      --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0040733      --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0043563      --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0044987      --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
ET0090308      --> GATCCACATGCCCAGCCCCATAATCGAAAGGTGTTGCAGCACTTCCAGTA
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               851    -    901
RU26660        --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
RH37AM72       <-- GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
ET0084603      <-- ..................................................
CT0130523      <-- GAAACATCTT........................................
CT0133534      <-- GAAACATCTT........................................
ET0133693      <-- GAAACATCTTCGAT....................................
CT0026210      <-- GAAACATCTTCGATTGTTTCTCC-AGTTTT....................
ET0067635      <-- GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAA-AGGCTGTGG
CT0040400      <-- GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGC.....
CT0015508      <-- GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
ET0038592      <-- .......................................ATAGGCTGTGG
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
RH20T58        --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
CT0000848      --> ..................................................
CT0040156      --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTA.................
ET0040733      --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAG.......
ET0043563      --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
ET0044987      --> GAAACATCTTCGATTGTTTCTCCTAGTTTTGTAGTTAGAATA........
ET0090308      --> GAAACATCTTCGATTGTTTCTCC-AGTTTTGTAGTTAGAATAGGCTGTGG
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               901    -    951
RU26660        --> TCATGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- TCATGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
RH37AM72       <-- TCGTGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- TCATGAGAGCAGACTTAATGGCCGCAGGGCTCCAG...............
CT0040400      <-- ..................................................
CT0015508      <-- TCATGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0038592      <-- TCATGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> TCATGAGGGCAGACTTAATGGCCGCAGGACTCCAGTCTGGG-TGAGCCGC
RH20T58        --> TCATGAGGGCAGACTTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> TCATGAGGGCAGACTTA.................................
ET0044987      --> ..................................................
ET0090308      --> TCATGAGGGCAGACTTAAT...............................
CT0028301      --> ..............TTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
CT0042004      --> ..............TTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0073654      --> ..............TTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0074684      --> ..............TTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0078355      --> ..............TTAATGGCCGCAGGGCTCCAGTCTGGG-TGAGCCGC
ET0142000      --> ...................GGCCGCAGGGCTCCAGTCTGGGGTGAGCCGC
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               951    -   1001
RU26660        --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- CTTGACAAGGGCCGCGAGCCCACTCACGTGTGGACACGACATGG-ATGT.
RH37AM72       <-- CTTGACAAGGGCCGCGAGCCCACTCACGTGTGGACACGACATGG-ATGT.
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
ET0038592      <-- CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
ET0093671      <-- .................................ACACGACATGG-ATGTA
ET0035305      <-- .........................................TGG-ATGTA
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> CTTGACAAGGGCTGCGAGCCCACTCATGTGTGGACACGACATGG-ATGT.
RH20T58        --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGT.
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
CT0042004      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
ET0073654      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
ET0074684      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGGGATGTA
ET0078355      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
ET0142000      --> CTTGACAAGGGCTGCGAGCCCACTCACGTGTGGACACGACATGG-ATGTA
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1001   -   1051
RU26660        --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- CCTGAAATGATGTTGAA.................................
ET0038592      <-- CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0093671      <-- CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0035305      <-- CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0037248      <-- CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0069998      <-- ..........TGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0078397      <-- ..........TGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0102715      <-- ..........TGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0069369      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0073943      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0091397      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0094370      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0099989      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0100511      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0103996      <-- ...........GTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0064685      <-- .........................................AAGTCCAGT
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
CT0042004      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0073654      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0074684      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0078355      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
ET0142000      --> CCTGAAATGATGTTGAAGACCACACTCCTCTTGTCTTCAGGAAGTCCAGT
CT0062000      --> ......................CACTCCTCTTGTCTTCAGGAAGTCCAGT
CT0007329      --> ..............................TTGTCTTCAGGAAGTCCAGT
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1051   -   1101
RU26660        --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCC.......
ET0093671      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0035305      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0037248      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0069998      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0078397      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0102715      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0069369      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0073943      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0091397      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0094370      <-- TGGTCCAACTGCGCCAGTCCACCCCAGCTAGGATGTTCATTCCTGGTGCT
ET0099989      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0100511      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0103996      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0064685      <-- TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
CT0042004      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0073654      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0074684      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0078355      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
ET0142000      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
CT0062000      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
CT0007329      --> TGGTCCAACTGCGCCAGTCCACCC-AGCTAGGATGTTCATTCCTGGTGCT
CT0103553      --> ....................ACCC-AGCTAGGATGTTCATTCCTGGTGCT
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1101   -   1151
RU26660        --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0035305      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0037248      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0069998      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0078397      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0102715      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0069369      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0073943      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0091397      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0094370      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0099989      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0100511      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0103996      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0064685      <-- ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGT.......
CT0042004      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGT.......
ET0073654      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGT.......
ET0074684      --> ATCAAGTCTGGTTTGAGTACTTCGTGGAGTGACAGAATTCGG........
ET0078355      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGT.......
ET0142000      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGG........
CT0062000      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
CT0007329      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
CT0103553      --> ATCAAGTCTGGTTTGAGTACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
RH27AC299      --> ..................ACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
RH40BF37       --> ..................ACTTC-TGGAGTGACAGAATTCGGTCCTCTAG
ET0065648      --> ..............................................CTAG
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1151   -   1201
RU26660        --> AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0035305      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0037248      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0069998      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0078397      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0102715      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0069369      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0073943      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0091397      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0094370      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0099989      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0100511      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0103996      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0064685      <-- AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
CT0023367      <-- ............CCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
CT0032176      <-- .............CACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
CT0002284      <-- .........................AGGTTGGACGCCTACCTCCGTTTCT
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> AGCTAAACGCAGCCACTACTGGTGAAGGT.....................
CT0007329      --> AGCTAAACGCAGCCACTACTGGTGAAGGTTGGA.................
CT0103553      --> AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
RH27AC299      --> AGCTAAACGCAGCCACTACTGGTGA-GGTTGGACGCCTACCTCCGTTTCT
RH40BF37       --> AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0065648      --> AGCTAAACGCAGCCACTACTGGTGAAGGTTGGACGCCTACCTCCGTTTCT
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1201   -   1251
RU26660        --> CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- CCAAGAGAAATTGTTGCTGTTGGAT.........................
ET0035305      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGA...............
ET0037248      <-- CCAAGAGAAATTGTTGCTGTTGGATTAG......................
ET0069998      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0078397      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0102715      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0069369      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0073943      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0091397      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0094370      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAAataataagac
ET0099989      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0100511      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0103996      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0064685      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
CT0023367      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
CT0032176      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
CT0002284      <-- CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
RH27AC299      --> CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
RH40BF37       --> CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0065648      --> CCAAGAGAAATTGTTGCTGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0139888      --> .................TGTTGGATTAGAATCGGATGCAATATAGCTCTT
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1251   -   1301
RU26660        --> TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- TAa...............................................
ET0078397      <-- TA................................................
ET0102715      <-- TA................................................
ET0069369      <-- TA................................................
ET0073943      <-- TAa...............................................
ET0091397      <-- TA................................................
ET0094370      <-- tactttaa..........................................
ET0099989      <-- TA................................................
ET0100511      <-- TAa...............................................
ET0103996      <-- TA................................................
ET0064685      <-- TATTGCGTCACCAGCTTTCTGG-CC-AACT....................
CT0023367      <-- TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
CT0032176      <-- TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
CT0002284      <-- TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
RH41BG53       <-- .......................tC-AACTGCTGCTGTAGCCAAGAAATG
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> TATTG.............................................
RH27AC299      --> TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
RH40BF37       --> TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0065648      --> TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0139888      --> TATTGCGTCACCAGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0138968      --> ............AGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0139957      --> ...........aAGCTTTCTGGGCCAAACTGCTGCTGTAGGCAAGAAATA
ET0140059      --> ............AGCTTTCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0091342      --> .................TCTGG-CC-AACTGCTGCTGTAGGCAAGAAATA
ET0085206      --> ..................................gttaggtCAAGAAATA
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1301   -   1351
RU26660        --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
CT0032176      <-- TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATTTGGTCAAAATC
CT0002284      <-- TGCATCAGCAtca.....................................
RH41BG53       <-- TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0007383      <-- ........CAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
RH40BF37       --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0065648      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0139888      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0138968      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0139957      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0140059      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0091342      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTGTT-GGTCAAAATC
ET0085206      --> TGCATCAGCAACAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0059118      --> ...........CAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
ET0087684      --> ...........CAAGCTCTTCACCATATGTTTCGGTATT-GGTCAAAATC
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1351   -   1401
RU26660        --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ATTCCCAC..........................................
CT0032176      <-- ATTCCCAac.........................................
CT0002284      <-- ..................................................
RH41BG53       <-- ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0007383      <-- ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0093196      <-- ........................ACCACCAGACTCTTTTGAACCCTCGG
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
RH40BF37       --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0065648      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGA.................
ET0139888      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0138968      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0139957      --> ATTCCCACACCACCA...................................
ET0140059      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0091342      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0085206      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0059118      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
ET0087684      --> ATTCCCACACCACCAGCCTTTTTCACCACCAGACTCTTTTGAACCCTCGG
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1401   -   1451
RU26660        --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0007383      <-- AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0093196      <-- AGTTCCCC-TC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0108490      <-- ..TTCCCCTCC-GGTCACATAC-ACAATCTTCCC-GG-TCAA-CCTTTGT
ET0079441      <-- .....CCCCTCCGGTCACATACCACAATCTTCCCCGG--CAA-CCTTTG-
ET0108726      <-- ..........C-GGTCACATACCACAATCTTCCC-GGTCCAACCCTTTGT
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
RH40BF37       --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0065648      --> ..................................................
ET0139888      --> AGTTCCCCCTC-GGTCACATA.............................
ET0138968      --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0139957      --> ..................................................
ET0140059      --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0091342      --> AGTTCCCCCTC-GGTCACATACTACAATCTTCCC-GG--CAA-CCTTTG-
ET0085206      --> AGTTCCCCCTC-GGTCACATACCACAATCTTCCC-GG--CAA-CCTTTG-
ET0059118      --> AGTTCCCCCTC-GGTCACATACCACAATCT....................
ET0087684      --> AGTTCCCCCTC-GGTCACATACCACAATCT....................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1451   -   1501
RU26660        --> CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0007383      <-- CCGGAATCAGACTGCCG.................................
ET0093196      <-- CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0108490      <-- CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0079441      <-- CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0108726      <-- CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> CCGGAATCGGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
RH40BF37       --> CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0139957      --> ..................................................
ET0140059      --> CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0091342      --> CCGGAATCAGACTGCCGGGACTGCACAGATCACCACTCGAACTGCTCg..
ET0085206      --> CCGGAATCAGACTGCCGGGACTGCACAGATCA..................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ............TGCCGGGACTGCACAGATCACCACTCGAACTGCTCACA
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1501   -   1551
RU26660        --> TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
ET0007383      <-- ..................................................
ET0093196      <-- TTGCGAGCATCAACAAagtgg.............................
ET0108490      <-- TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
ET0079441      <-- TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
ET0108726      <-- TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
RH40BF37       --> TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> TTGCGAG...........................................
ET0139957      --> ..................................................
ET0140059      --> TTGCGAG...........................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> TTGCGAGCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
ET0021789      --> ......GCATCAACAAGTGGAATCAATCCACTAGACAAGGCCGTTCCCCT
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1551   -   1601
RU26660        --> GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
ET0079441      <-- GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
ET0108726      <-- GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
RH40BF37       --> GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
ET0021789      --> GTATAGAGATATACCTCTAAATTTCTTTGCATTTCCAAGGCTGACATAAG
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1601   -   1651
RU26660        --> CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTA.......
ET0079441      <-- CCGGGAAGTCCCCTGTCCAATGTTCCAGCGCCCACAGTAGTTA.......
ET0108726      <-- CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTA.......
CT0002946      <-- .....................................TAGTTATCCAAGG
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
RH40BF37       --> CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
ET0021789      --> CCGGGAAGTCCC-TGTCCAATGTTCCAGCGCCCACAGTAGTTATCCAAGG
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1651   -   1701
RU26660        --> CGCAACATTGGACAAGCTTCCCGCTTCCGGTCCACCGTTTCCAGCCGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- CGCAACATTGGACAAGCTTCCCGCTTCAGGTCCACCATTTCCAGCCGAAC
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- CGCAACATTGGACAAGCTTCCCGCTTCCGGTCCACCGTTTCCAGCCGAAC
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> CGCAACATTGGACAAGCTTCCCGCGTCAGGTCCACCATTTCCAGCCGAAC
RH40BF37       --> CGCAACATTGGACAAGCTTCCCGCTTCAGGTCCACCATTTCCAGCCGAAC
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> CGCAACATTGGACAAGCTT...............................
ET0021789      --> CGCAACATTGGACAAGCTTCCCGCTTCAGGTCCACCATTTCCAGCCGAAC
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1701   -   1751
RU26660        --> ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................  Control
ET0026991      <-- ..................................................  Ethylene
ET0038823      <-- ..................................................  Ethylene
CT0053317      <-- ..................................................  Control
ET0000372      <-- ..................................................  Ethylene
ET0086582      <-- ..................................................  Ethylene
CT0096011      <-- ..................................................  Control
ET0031626      <-- ..................................................  Ethylene
ET0040146      <-- ..................................................  Ethylene
ET0047759      <-- ..................................................  Ethylene
CT0110770      <-- ..................................................  Control
ET0038217      <-- ..................................................  Ethylene
ET0036162      <-- ..................................................  Ethylene
ET0061365      <-- ..................................................  Ethylene
CT0137091      <-- ..................................................  Control
CT0028750      <-- ..................................................  Control
ET0076845      <-- ..................................................  Ethylene
ET0093063      <-- ..................................................  Ethylene
CT0109559      <-- ..................................................  Control
ET0051229      <-- ..................................................  Ethylene
ET0125267      <-- ..................................................  Ethylene
ET0127395      <-- ..................................................  Ethylene
ET0048979      <-- ..................................................  Ethylene
ET0117079      <-- ..................................................  Ethylene
CT0037255      <-- ..................................................  Control
CT0010236      <-- ..................................................  Control
RH14K153       <-- ..................................................  WaterDS
RH37AM72       <-- ..................................................  WaterDS
ET0084603      <-- ..................................................  Ethylene
CT0130523      <-- ..................................................  Control
CT0133534      <-- ..................................................  Control
ET0133693      <-- ..................................................  Ethylene
CT0026210      <-- ..................................................  Control
ET0067635      <-- ..................................................  Ethylene
CT0040400      <-- ..................................................  Control
CT0015508      <-- ..................................................  Control
ET0038592      <-- ..................................................  Ethylene
ET0093671      <-- ..................................................  Ethylene
ET0035305      <-- ..................................................  Ethylene
ET0037248      <-- ..................................................  Ethylene
ET0069998      <-- ..................................................  Ethylene
ET0078397      <-- ..................................................  Ethylene
ET0102715      <-- ..................................................  Ethylene
ET0069369      <-- ..................................................  Ethylene
ET0073943      <-- ..................................................  Ethylene
ET0091397      <-- ..................................................  Ethylene
ET0094370      <-- ..................................................  Ethylene
ET0099989      <-- ..................................................  Ethylene
ET0100511      <-- ..................................................  Ethylene
ET0103996      <-- ..................................................  Ethylene
ET0064685      <-- ..................................................  Ethylene
CT0023367      <-- ..................................................  Control
CT0032176      <-- ..................................................  Control
CT0002284      <-- ..................................................  Control
RH41BG53       <-- ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACT  WaterDS
ET0007383      <-- ..................................................  Ethylene
ET0093196      <-- ..................................................  Ethylene
ET0108490      <-- ..................................................  Ethylene
ET0079441      <-- ..................................................  Ethylene
ET0108726      <-- ..................................................  Ethylene
CT0002946      <-- ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACC  Control
CT0107825      <-- ..................................................  Control
CT0128363      <-- ..................................................  Control
CT0129715      <-- ..................................................  Control
CT0132494      <-- ..................................................  Control
CT0130857      <-- ..................................................  Control
ET0040726      <-- ..................................................  Ethylene
ET0049512      <-- ..................................................  Ethylene
CT0109499      <-- ..................................................  Control
ET0008868      <-- ..................................................  Ethylene
ET0014265      <-- ..................................................  Ethylene
RH07D55        <-- ..................................................  WaterDS
CT0053728      <-- ..................................................  Control
ET0144066      <-- ..................................................  Ethylene
ET0036910      <-- ..................................................  Ethylene
ET0032458      <-- ..................................................  Ethylene
ET0134824      <-- ..................................................  Ethylene
CT0032721      <-- ..................................................  Control
CT0056151      --> ..................................................  Control
ET0008257      --> ..................................................  Ethylene
ET0005198      --> ..................................................  Ethylene
ET0006461      --> ..................................................  Ethylene
ET0008977      --> ..................................................  Ethylene
ET0054734      --> ..................................................  Ethylene
CT0012314      --> ..................................................  Control
CT0054281      --> ..................................................  Control
CT0071777      --> ..................................................  Control
CT0013286      --> ..................................................  Control
CT0023672      --> ..................................................  Control
CT0033300      --> ..................................................  Control
CT0042011      --> ..................................................  Control
CT0047769      --> ..................................................  Control
CT0051258      --> ..................................................  Control
CT0055695      --> ..................................................  Control
CT0061210      --> ..................................................  Control
CT0061612      --> ..................................................  Control
CT0063723      --> ..................................................  Control
CT0067961      --> ..................................................  Control
CT0035347      --> ..................................................  Control
RH06A129       --> ..................................................  WaterDS
RH31AF17       --> ..................................................  WaterDS
CT0052865      --> ..................................................  Control
CT0116217      --> ..................................................  Control
CT0116303      --> ..................................................  Control
CT0116699      --> ..................................................  Control
CT0116770      --> ..................................................  Control
CT0116916      --> ..................................................  Control
CT0117448      --> ..................................................  Control
CT0117641      --> ..................................................  Control
CT0115317      --> ..................................................  Control
CT0116137      --> ..................................................  Control
CT0117149      --> ..................................................  Control
CT0044541      --> ..................................................  Control
CT0130576      --> ..................................................  Control
CT0033828      --> ..................................................  Control
ET0138174      --> ..................................................  Ethylene
ET0055640      --> ..................................................  Ethylene
ET0001058      --> ..................................................  Ethylene
ET0068686      --> ..................................................  Ethylene
CT0016290      --> ..................................................  Control
RH19S22        --> ..................................................  WaterDS
RH20T58        --> ..................................................  WaterDS
CT0000848      --> ..................................................  Control
CT0040156      --> ..................................................  Control
ET0040733      --> ..................................................  Ethylene
ET0043563      --> ..................................................  Ethylene
ET0044987      --> ..................................................  Ethylene
ET0090308      --> ..................................................  Ethylene
CT0028301      --> ..................................................  Control
CT0042004      --> ..................................................  Control
ET0073654      --> ..................................................  Ethylene
ET0074684      --> ..................................................  Ethylene
ET0078355      --> ..................................................  Ethylene
ET0142000      --> ..................................................  Ethylene
CT0062000      --> ..................................................  Control
CT0007329      --> ..................................................  Control
CT0103553      --> ..................................................  Control
RH27AC299      --> ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACT  WaterDS
RH40BF37       --> ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACT  WaterDS
ET0065648      --> ..................................................  Ethylene
ET0139888      --> ..................................................  Ethylene
ET0138968      --> ..................................................  Ethylene
ET0139957      --> ..................................................  Ethylene
ET0140059      --> ..................................................  Ethylene
ET0091342      --> ..................................................  Ethylene
ET0085206      --> ..................................................  Ethylene
ET0059118      --> ..................................................  Ethylene
ET0087684      --> ..................................................  Ethylene
CT0031233      --> ..................................................  Control
ET0021789      --> ACGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAA..  Ethylene
CT0075446      --> .CGATACTAGAATACCCTGCGCCGCGGCAGAGAAAGCTCCAATGGCAACC  Control
ET0053317      --> ................................................CT  Ethylene
CT0113381      --> ..................................................  Control
CT0115402      --> ..................................................  Control
CT0117167      --> ..................................................  Control
CT0081942      --> ..................................................  Control
CT0088358      --> ..................................................  Control
CT0098506      --> ..................................................  Control
CT0023842      --> ..................................................  Control

               1751   -   1801
RU26660        --> GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
RH40BF37       --> GTGTCTCTATAATAATCAGACTGCGATCCACCAATAG.............
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
ET0053317      --> GTGTCTCTATAATAATCAGACTGCGATCCACCAATAGACAAA-GACAAAA
CT0113381      --> .............................ACCAATAGACAAA-GACAAAA
CT0115402      --> .............................ACCAATAGACAAA-GACAAAA
CT0117167      --> ............................accaAATAGACAAAAGACAAAA
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               1801   -   1851
RU26660        --> -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0107825      <-- .....................................CTATGATATCAGA
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ACATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCA..
ET0053317      --> -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0113381      --> -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0115402      --> -CATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0117167      --> ACATCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0081942      --> ...TCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0088358      --> ...TCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0098506      --> ...TCAACCCCATCCTCAACCGCCTTCTCCATTGCAGCTATGATATCAGA
CT0023842      --> ..................................................

               1851   -   1901
RU26660        --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTGTATGTGGCCACTCGAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ACCGAAAC..........................................
CT0107825      <-- ACCGAAACACCCTCCAAGCCAGCAAGCCTTGTATGTGGCCACTCGAGCTT
CT0128363      <-- ........ACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0129715      <-- ........ACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0132494      <-- ........ACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0130857      <-- .............CCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
ET0040726      <-- ......................CAAGCCTTATATGTGGCCACTCGAGCTT
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0113381      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTGTATGTGGCCACTCGAGCTT
CT0115402      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTGTATGTGGCCACTCGAGCTT
CT0117167      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTGTATGTGGCCACTCGAGCTT
CT0081942      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0088358      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0098506      --> ACCGAAACACCCTCCAAGCCAGCAAGCCTTATATGTGGCCACTCGAGCTT
CT0023842      --> ..................................................

               1901   -   1951
RU26660        --> GCGGCGCCATACCCCTTGCTTTCCCT-GGAGCATAACCAAGGAA-GCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- GCGGCGCCATACCCCTTGCTTTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0128363      <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0129715      <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0132494      <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0130857      <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
ET0040726      <-- GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
ET0049512      <-- .........acccctacGCTGTCCCTCGGAGCATAACCAAGGAAAGCTAG
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> GCGGCGCCATACCCCTAGCTGTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0113381      --> GCGGCGCCATACCCCTTGCTTTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0115402      --> GCGGCGCCATACCCCTTGCTTTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0117167      --> GCGGCGCCATACCCCTTGCTTTCCCT-GGAGCATAACCAAGGAA-GCTAG
CT0081942      --> GCGGCGCCATACCCCTAGCTGTCCCT-GGAG...................
CT0088358      --> GCGGCGCCATACCCCTAGCTGTCCCT-GGA....................
CT0098506      --> GCGGCGCCATACCCCTAGCTGTCCCT-GGAG...................
CT0023842      --> ..................................................

               1951   -   2001
RU26660        --> CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0128363      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0129715      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0132494      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0130857      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
ET0040726      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
ET0049512      <-- CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0109499      <-- ............................TTGTTGAGGTGTGAGTTCCATG
ET0008868      <-- ...........................................cttgATG
ET0014265      <-- ...............................................ATG
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> CTCC..............................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> CTCCTGTAACAACACGACCCCGCgc.........................
CT0113381      --> CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0115402      --> CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0117167      --> CTCCTGTAACAACA-GACCCCGCCGCAGTTGTTGAGGTGTGAGTTCCATG
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2001   -   2051
RU26660        --> GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCACCAACAGGTC
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
CT0128363      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTT..............
CT0129715      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGG..
CT0132494      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGG..
CT0130857      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAAC.....
ET0040726      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
ET0049512      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
CT0109499      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
ET0008868      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
ET0014265      <-- GCCATCGTCATCTCTCGGTGACTTTGATTCTACGTTTTCATCAACAGGTC
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> GCCATCGTCATCTCTCGGT...............................
CT0115402      --> GCCATCGTCATCTCTCGGT...............................
CT0117167      --> GCCATCGTCATCTCTCGGTG..............................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2051   -   2101
RU26660        --> CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- CAAACGCTGCTTCGT...................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAA...................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
ET0049512      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
CT0109499      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
ET0008868      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
ET0014265      <-- CAAACGCTGCTTCGTACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
RH07D55        <-- ...............ACCCGTTTGAGAAAAACGCAGCACCAATCAGCTTT
CT0053728      <-- ..................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2101   -   2151
RU26660        --> TTGTTGCAGCTCGAAGAGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- TTGTTGCAGC........................................
ET0049512      <-- TTGTTGCAGC........................................
CT0109499      <-- TTGTTGCAGCTCGAAGAGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
ET0008868      <-- TTGTTGCAGCTCGAAGAGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
ET0014265      <-- TTGTTGCAGCTCGAAGAGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
RH07D55        <-- TTGTTGCAGCTCGAAGAGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
CT0053728      <-- ................AGTTGAATGTCTTTCCCTGCTGGCACGACCCTTT
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2151   -   2201
RU26660        --> CCAGCCAGTCGGCACTGGTCCAAAACCAGTGTCGTCGTAGCTTTTGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- CCAGCCAGTCGGCACTGGTCCAAAACCAGTGTCGTCGTAGCTTTTGAGCT
ET0008868      <-- CCAGCCAGTCGGCACTGGTCCAAAACCAG.....................
ET0014265      <-- CCAGCCAGTCGGCACTGGTCCAAAACCAGTGTCGTCGTAGCTTT......
RH07D55        <-- CCAGCCAGTCGGCACTGGTCCAAAACCAGTGTCGTCGTAGCTTTTGAGCT
CT0053728      <-- CCAGCCAGTCGGCACTGGTCCAAAACCAGTGTCGTCGTAGCTTTTGAGCT
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2201   -   2251
RU26660        --> CCGGCCACACGCCGGTGTCCACTACTCCGATGATCACCTCACCCATCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- CCGGCCACACGCCGGTGTCCACTAC.........................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- CCGGCCACACGCCGGTGTCCACTACTCCAATGATCACCTCACCCATCTTA
CT0053728      <-- CCGGCCACACGCCGGTGTCCACTACTCCGATGATCACCTCACCCATCTTA
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2251   -   2301
RU26660        --> TCCGAAGCCGGTAACACAGCTTCGCTTTTGCGTAGTCCTAGAAACTCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- TCCGAAGCCGGTAACACAGCTTCGCTTTTGCGTAGTCCTAGAAACTCCGG
CT0053728      <-- TCCGAAGCCGGTAACACAGCTTCGCTTTTGCGTAGTCCTAGAAACTCCGG
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ...............ACAGCTTCGCTTTTGCGTAGTCCTAGAAACTCCGG

               2301   -   2351
RU26660        --> AGTCCTAGTTGTGTGAAGCTCGTACCTCCTTTCCGGCAGGACAGAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- AGTCCTAGTTGTGTGAAGCTCGT...........................
CT0053728      <-- AGTCCTAGTTGTGTGAAGCTCGTACCTCCTTTCCGGCAGGACAGAGAGAA
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> AGTCCTAGTTGTGTGAAGCTCGTACCTCCTTTCCGGCAGGACAGAGAGAA

               2351   -   2401
RU26660        --> TTCCTGGCTGCTTTTCGAGCTGCTCAGCTTCCTCGGCAGTTAGCCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- T.................................................
ET0144066      <-- ..................................................
ET0036910      <-- ..................................................
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> TTCCTGGCTGCTTTTCGAGCTGCTCAGCTTCCTCGGCAGTTAGCCTTGTT

               2401   -   2451
RU26660        --> GAGTAGCCATGGATGACAGTCTTGTACGTGTAAAGCATGTCAGCTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- .............TGACAGTCTTGTACGTGTAAAGCATGTCAGCTGAATC
ET0036910      <-- ..................................aCATGTCAGCTGAATC
ET0032458      <-- ..................................................
ET0134824      <-- ..................................................
CT0032721      <-- ..................................................
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> GAGTAGCCATGGATGACAGTCTTGTACGTGTAAAGCATGTCAGCTGAATC

               2451   -   2501
RU26660        --> GGAGACCGCTTTCAACGACGAGCCGTACCAGTTGACATGGTCGTCGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- GGAGACCGCTTTCAACGACGAGCCGTACCAGTTGACATGGTCGTCGTCGA
ET0036910      <-- GGAGACCGCTTTCAACGACGAGCCGTACCAGTTGACATGGTCGTCGTCGA
ET0032458      <-- ...............CGACGAGCCGTACCAGTTGACATGGTCGTCGTCGA
ET0134824      <-- ......................CCGTACCAGTTGACATGGTCGTCGTCGA
CT0032721      <-- .......................CGTACCAGTTGACATGGTCGTCGTCGA
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> GGAGACCGCTTTCAACGACGAGCCGTACCAGTTGACATGGTCGTCGTCGA

               2501   -   2551
RU26660        --> AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACGTCTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACGTCTTTTTC
ET0036910      <-- AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACGTCTTTTTC
ET0032458      <-- AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACGTCTTTTTC
ET0134824      <-- AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACG-CTTTTTC
CT0032721      <-- AACTCGCGGGTATTTGGGACTTGTCCATGTGAATGATGTACGTCTTTTTC
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> AAC...............................................

               2551   -   2601
RU26660        --> ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
ET0036910      <-- ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
ET0032458      <-- ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
ET0134824      <-- ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
CT0032721      <-- ACATGCTCACTCTCTTCTGCTACCACCTCACAGTTGTGAGTGATAACCAG
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2601   -   2651
RU26660        --> AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
ET0036910      <-- AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
ET0032458      <-- AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
ET0134824      <-- AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
CT0032721      <-- AACCATAAGCGTTACCAGCAGCACGGATTTCGATGCCTTCTTCATCTTGT
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2651   -   2701
RU26660        --> TCAAACCTGAGCTTATGAGTTTCAGGAACAAATTTCTTAGTGCCGACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0041963      <-- ..................................................
ET0026991      <-- ..................................................
ET0038823      <-- ..................................................
CT0053317      <-- ..................................................
ET0000372      <-- ..................................................
ET0086582      <-- ..................................................
CT0096011      <-- ..................................................
ET0031626      <-- ..................................................
ET0040146      <-- ..................................................
ET0047759      <-- ..................................................
CT0110770      <-- ..................................................
ET0038217      <-- ..................................................
ET0036162      <-- ..................................................
ET0061365      <-- ..................................................
CT0137091      <-- ..................................................
CT0028750      <-- ..................................................
ET0076845      <-- ..................................................
ET0093063      <-- ..................................................
CT0109559      <-- ..................................................
ET0051229      <-- ..................................................
ET0125267      <-- ..................................................
ET0127395      <-- ..................................................
ET0048979      <-- ..................................................
ET0117079      <-- ..................................................
CT0037255      <-- ..................................................
CT0010236      <-- ..................................................
RH14K153       <-- ..................................................
RH37AM72       <-- ..................................................
ET0084603      <-- ..................................................
CT0130523      <-- ..................................................
CT0133534      <-- ..................................................
ET0133693      <-- ..................................................
CT0026210      <-- ..................................................
ET0067635      <-- ..................................................
CT0040400      <-- ..................................................
CT0015508      <-- ..................................................
ET0038592      <-- ..................................................
ET0093671      <-- ..................................................
ET0035305      <-- ..................................................
ET0037248      <-- ..................................................
ET0069998      <-- ..................................................
ET0078397      <-- ..................................................
ET0102715      <-- ..................................................
ET0069369      <-- ..................................................
ET0073943      <-- ..................................................
ET0091397      <-- ..................................................
ET0094370      <-- ..................................................
ET0099989      <-- ..................................................
ET0100511      <-- ..................................................
ET0103996      <-- ..................................................
ET0064685      <-- ..................................................
CT0023367      <-- ..................................................
CT0032176      <-- ..................................................
CT0002284      <-- ..................................................
RH41BG53       <-- ..................................................
ET0007383      <-- ..................................................
ET0093196      <-- ..................................................
ET0108490      <-- ..................................................
ET0079441      <-- ..................................................
ET0108726      <-- ..................................................
CT0002946      <-- ..................................................
CT0107825      <-- ..................................................
CT0128363      <-- ..................................................
CT0129715      <-- ..................................................
CT0132494      <-- ..................................................
CT0130857      <-- ..................................................
ET0040726      <-- ..................................................
ET0049512      <-- ..................................................
CT0109499      <-- ..................................................
ET0008868      <-- ..................................................
ET0014265      <-- ..................................................
RH07D55        <-- ..................................................
CT0053728      <-- ..................................................
ET0144066      <-- TCAAACCTGAGCTTATGAGTTTCAGGAACAAATTTCTTAGTGCCGACGGA
ET0036910      <-- TCAAACCTGAGCTTAT..................................
ET0032458      <-- TCAAACCTGAGCTTATGAGTTTCAGGAACAAATTTCTTAGTGCCG.....
ET0134824      <-- TCAAACCTGAGCTTATGAGTTTCAGGAACAAATTTCTTAGTGCCGACGGA
CT0032721      <-- TCAAACCTGAGCTTATGAGTTTCAGGAACAAATTTCTTAGTGCCGACGGA
CT0056151      --> ..................................................
ET0008257      --> ..................................................
ET0005198      --> ..................................................
ET0006461      --> ..................................................
ET0008977      --> ..................................................
ET0054734      --> ..................................................
CT0012314      --> ..................................................
CT0054281      --> ..................................................
CT0071777      --> ..................................................
CT0013286      --> ..................................................
CT0023672      --> ..................................................
CT0033300      --> ..................................................
CT0042011      --> ..................................................
CT0047769      --> ..................................................
CT0051258      --> ..................................................
CT0055695      --> ..................................................
CT0061210      --> ..................................................
CT0061612      --> ..................................................
CT0063723      --> ..................................................
CT0067961      --> ..................................................
CT0035347      --> ..................................................
RH06A129       --> ..................................................
RH31AF17       --> ..................................................
CT0052865      --> ..................................................
CT0116217      --> ..................................................
CT0116303      --> ..................................................
CT0116699      --> ..................................................
CT0116770      --> ..................................................
CT0116916      --> ..................................................
CT0117448      --> ..................................................
CT0117641      --> ..................................................
CT0115317      --> ..................................................
CT0116137      --> ..................................................
CT0117149      --> ..................................................
CT0044541      --> ..................................................
CT0130576      --> ..................................................
CT0033828      --> ..................................................
ET0138174      --> ..................................................
ET0055640      --> ..................................................
ET0001058      --> ..................................................
ET0068686      --> ..................................................
CT0016290      --> ..................................................
RH19S22        --> ..................................................
RH20T58        --> ..................................................
CT0000848      --> ..................................................
CT0040156      --> ..................................................
ET0040733      --> ..................................................
ET0043563      --> ..................................................
ET0044987      --> ..................................................
ET0090308      --> ..................................................
CT0028301      --> ..................................................
CT0042004      --> ..................................................
ET0073654      --> ..................................................
ET0074684      --> ..................................................
ET0078355      --> ..................................................
ET0142000      --> ..................................................
CT0062000      --> ..................................................
CT0007329      --> ..................................................
CT0103553      --> ..................................................
RH27AC299      --> ..................................................
RH40BF37       --> ..................................................
ET0065648      --> ..................................................
ET0139888      --> ..................................................
ET0138968      --> ..................................................
ET0139957      --> ..................................................
ET0140059      --> ..................................................
ET0091342      --> ..................................................
ET0085206      --> ..................................................
ET0059118      --> ..................................................
ET0087684      --> ..................................................
CT0031233      --> ..................................................
ET0021789      --> ..................................................
CT0075446      --> ..................................................
ET0053317      --> ..................................................
CT0113381      --> ..................................................
CT0115402      --> ..................................................
CT0117167      --> ..................................................
CT0081942      --> ..................................................
CT0088358      --> ..................................................
CT0098506      --> ..................................................
CT0023842      --> ..................................................

               2701   -   2751
RU26660        --> AGTGAAATTCACA
                   ~~~~~~~~~~~~~
CT0041963      <-- .............
ET0026991      <-- .............
ET0038823      <-- .............
CT0053317      <-- .............
ET0000372      <-- .............
ET0086582      <-- .............
CT0096011      <-- .............
ET0031626      <-- .............
ET0040146      <-- .............
ET0047759      <-- .............
CT0110770      <-- .............
ET0038217      <-- .............
ET0036162      <-- .............
ET0061365      <-- .............
CT0137091      <-- .............
CT0028750      <-- .............
ET0076845      <-- .............
ET0093063      <-- .............
CT0109559      <-- .............
ET0051229      <-- .............
ET0125267      <-- .............
ET0127395      <-- .............
ET0048979      <-- .............
ET0117079      <-- .............
CT0037255      <-- .............
CT0010236      <-- .............
RH14K153       <-- .............
RH37AM72       <-- .............
ET0084603      <-- .............
CT0130523      <-- .............
CT0133534      <-- .............
ET0133693      <-- .............
CT0026210      <-- .............
ET0067635      <-- .............
CT0040400      <-- .............
CT0015508      <-- .............
ET0038592      <-- .............
ET0093671      <-- .............
ET0035305      <-- .............
ET0037248      <-- .............
ET0069998      <-- .............
ET0078397      <-- .............
ET0102715      <-- .............
ET0069369      <-- .............
ET0073943      <-- .............
ET0091397      <-- .............
ET0094370      <-- .............
ET0099989      <-- .............
ET0100511      <-- .............
ET0103996      <-- .............
ET0064685      <-- .............
CT0023367      <-- .............
CT0032176      <-- .............
CT0002284      <-- .............
RH41BG53       <-- .............
ET0007383      <-- .............
ET0093196      <-- .............
ET0108490      <-- .............
ET0079441      <-- .............
ET0108726      <-- .............
CT0002946      <-- .............
CT0107825      <-- .............
CT0128363      <-- .............
CT0129715      <-- .............
CT0132494      <-- .............
CT0130857      <-- .............
ET0040726      <-- .............
ET0049512      <-- .............
CT0109499      <-- .............
ET0008868      <-- .............
ET0014265      <-- .............
RH07D55        <-- .............
CT0053728      <-- .............
ET0144066      <-- AGTGAAATTCACA
ET0036910      <-- .............
ET0032458      <-- .............
ET0134824      <-- AGTGAAATTCAC.
CT0032721      <-- AGTGAAATTCACA
CT0056151      --> .............
ET0008257      --> .............
ET0005198      --> .............
ET0006461      --> .............
ET0008977      --> .............
ET0054734      --> .............
CT0012314      --> .............
CT0054281      --> .............
CT0071777      --> .............
CT0013286      --> .............
CT0023672      --> .............
CT0033300      --> .............
CT0042011      --> .............
CT0047769      --> .............
CT0051258      --> .............
CT0055695      --> .............
CT0061210      --> .............
CT0061612      --> .............
CT0063723      --> .............
CT0067961      --> .............
CT0035347      --> .............
RH06A129       --> .............
RH31AF17       --> .............
CT0052865      --> .............
CT0116217      --> .............
CT0116303      --> .............
CT0116699      --> .............
CT0116770      --> .............
CT0116916      --> .............
CT0117448      --> .............
CT0117641      --> .............
CT0115317      --> .............
CT0116137      --> .............
CT0117149      --> .............
CT0044541      --> .............
CT0130576      --> .............
CT0033828      --> .............
ET0138174      --> .............
ET0055640      --> .............
ET0001058      --> .............
ET0068686      --> .............
CT0016290      --> .............
RH19S22        --> .............
RH20T58        --> .............
CT0000848      --> .............
CT0040156      --> .............
ET0040733      --> .............
ET0043563      --> .............
ET0044987      --> .............
ET0090308      --> .............
CT0028301      --> .............
CT0042004      --> .............
ET0073654      --> .............
ET0074684      --> .............
ET0078355      --> .............
ET0142000      --> .............
CT0062000      --> .............
CT0007329      --> .............
CT0103553      --> .............
RH27AC299      --> .............
RH40BF37       --> .............
ET0065648      --> .............
ET0139888      --> .............
ET0138968      --> .............
ET0139957      --> .............
ET0140059      --> .............
ET0091342      --> .............
ET0085206      --> .............
ET0059118      --> .............
ET0087684      --> .............
CT0031233      --> .............
ET0021789      --> .............
CT0075446      --> .............
ET0053317      --> .............
CT0113381      --> .............
CT0115402      --> .............
CT0117167      --> .............
CT0081942      --> .............
CT0088358      --> .............
CT0098506      --> .............
CT0023842      --> .............