SNPs of unigene RU26770
               1      -     51
RU26770        --> TTTTTTTATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- TTTTTTTATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGCTTA
CT0000153      <-- ..........GAATTCGAAAACTTTTATTTAAACATAGAAGTTGGGCTTA
ET0144319      <-- .......................TT-ATTTAAACATAGAAGTTGGGTTTA
CT0055185      <-- ..............................AAACATAGAAGTTGGGTTTA
CT0076789      <-- ..............................AAACATAGAAGTTGGGTTTA
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGCTTA
CT0100761      --> .......ATGGA-TTCGAAAACTTT-ATTTAAACATAGAAGTTGGGTTTA
ET0009220      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGTTTA
ET0022759      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGTTTA
ET0038434      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGTTTA
ET0054444      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGCTTA
ET0055094      --> .......ATGGAATTCGAAAACTTT-ATTTAAACATAGAAGTTGGGTTTA
CT0090721      --> .......................................AGTTGGGCTTA
CT0095341      --> .......................................AGTTGGGCTTA
CT0097057      --> .......................................AGTTGGGCTTA
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               51     -    101
RU26770        --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0000153      <-- AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0144319      <-- AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0055185      <-- AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0076789      <-- AAACTTTACCCTAAAACATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0034975      <-- ..........CTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0036514      <-- ..........CTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0100761      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0009220      --> AA-CTTTACGCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0022759      --> AA-CTTTACGCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0038434      --> AA-CTTTACGCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0054444      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0055094      --> AA-CTTTACGCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0090721      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0095341      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
CT0097057      --> AA-CTTTACCCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0080959      --> .........CCTAAA-CATTATTGTTAACTAGAAACAAGTTCATATGAAT
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               101    -    151
RU26770        --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- TCAAACAAGGAAAACAAAAGATCATTACAAGGAAAAAGAATGAATTACAC
CT0000153      <-- TCAAACAAGGAAAACAAAATATCATTACAAGGAAAAAGAATGAATTACAC
ET0144319      <-- TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
CT0055185      <-- TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTAC..
CT0076789      <-- TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTAC..
ET0034975      <-- TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0036514      <-- TCAAACAAGGAAAACAAAAGATTATTACA-GGAAAAAGAATGAATTACAC
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> TCAAACAAGGAAAACAAAAGATCATTACAAGGAAAAAaaa..........
CT0100761      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0009220      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0022759      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0038434      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0054444      --> TCAAACAAGGAAAACAAAAGATCATTACAAGGAAAAAGAATGAATTACAC
ET0055094      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
CT0090721      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
CT0095341      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
CT0097057      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0080959      --> TCAAACAAGGAAAACAAAAGATTATTACAAGGAAAAAGAATGAATTACAC
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               151    -    201
RU26770        --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAA....
CT0000153      <-- CGTGAGGGG.........................................
ET0144319      <-- CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0036514      <-- CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTG......
ET0009220      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0022759      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0038434      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0054444      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0055094      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
CT0090721      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAATACT
CT0095341      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
CT0097057      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0080959      --> CGTGAGGGGAGATGGAGATGGAGAGCTTGAACGTTGGAATCTTGAAT-CT
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               201    -    251
RU26770        --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0036514      <-- TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0022759      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0038434      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0054444      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0055094      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
CT0090721      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
CT0095341      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
CT0097057      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0080959      --> TGGAAGCAAGTCTTCAAGGTGGACGATGGAGGCTATGTCCTCACGGCTTC
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               251    -    301
RU26770        --> TTCTTCTTCTCTTT-ACTTGAAAATG-CAAAACTAAGAACTAGAGAAT-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................  Control
CT0000153      <-- ..................................................  Control
ET0144319      <-- TTCTTCTTCTCTTT-ACTTGAAAATG-CAAAACTAAGAACTAGAGAAT-G  Ethylene
CT0055185      <-- ..................................................  Control
CT0076789      <-- ..................................................  Control
ET0034975      <-- TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTAAGAACTAGAGGAT-G  Ethylene
ET0036514      <-- TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTAAGAACTAGAGGAT-G  Ethylene
CT0099338      <-- ..................................................  Control
CT0031531      <-- ..................................................  Control
CT0039478      <-- ..................................................  Control
CT0041442      <-- ..................................................  Control
CT0108579      <-- ..................................................  Control
CT0027457      <-- ..................................................  Control
CT0041622      <-- ..................................................  Control
CT0055826      <-- ..................................................  Control
ET0068462      <-- ..................................................  Ethylene
ET0077720      <-- ..................................................  Ethylene
CT0082383      <-- ..................................................  Control
CT0092554      <-- ..................................................  Control
CT0008073      <-- ..................................................  Control
ET0092763      <-- ..................................................  Ethylene
CT0012239      <-- ..................................................  Control
CT0025926      <-- ..................................................  Control
CT0054390      <-- ..................................................  Control
CT0020320      --> ..................................................  Control
CT0100761      --> ..................................................  Control
ET0009220      --> TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTAga.............  Ethylene
ET0022759      --> TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTAga.............  Ethylene
ET0038434      --> TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTA...............  Ethylene
ET0054444      --> TTCTTCTTCTCTTTTACTTGAAAATG-CAAAACTAAG.............  Ethylene
ET0055094      --> TTCTTCTTTTCTTT-ACTTGAAAATG-CAAAACTAga.............  Ethylene
CT0090721      --> TTCTTCTTCTCTTT-ACTTGAAAATGACAAAACTAAGAACTAGAGAATag  Control
CT0095341      --> TTCTTCTTCTCTTT-ACTTGAAAATGACAAAACTAAGAACTAGAGAATAG  Control
CT0097057      --> TTCTTCTTCTCTTT-ACT-GAAAATGACAAAACTAAGAACTAGAGAATAG  Control
ET0080959      --> TTCTTCTTCTCTTT-ACTTGAAAATG-CAAAACTAAGAACTAGAGAAT-G  Ethylene
ET0139103      --> ..................................................  Ethylene
CT0137583      --> ..................................................  Control
ET0144112      --> ..................................................  Ethylene
CT0024693      --> ..................................................  Control
ET0042973      --> ..................................................  Ethylene
ET0001693      --> ..................................................  Ethylene

               301    -    351
RU26770        --> GAAAAGAAATATGGAGAGGAAATGGAGAGACaaagaagatgagatgaatg
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- GAAAAGAAATATGGAGAGGAAA............................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- GAAAAGAAATATGGAGAGGAAATGGAGAGAC...................
ET0036514      <-- GAAAAGAAATATGGAGAGGAAATGGAGAGAC...................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ggaaaaaggaaa......................................
CT0095341      --> GAAAAaggaaaatgggaaaagga...........................
CT0097057      --> GAAAAaggaaaatggaaaaggaa...........................
ET0080959      --> GAAAAGGAAAATGGAAAGGAAA............................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               351    -    401
RU26770        --> aaggaagatgtttttgagagtgagaggagaaggtgtttatATAGGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ........................................ATAGGGAAGA
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               401    -    451
RU26770        --> GAAAGAAGAGTGAAATTGGAAAAGATGGAGTAAATTAGTGTGAGTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- GAAAGAAGAGTGAAATTGGAAAAGATGGAGTAAATTAGTGTGAGTAATGA
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ......................gatggtggtggATTAGTGTGAGTAATGA
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               451    -    501
RU26770        --> TGGAGAAAACATGATGATTACACCCTAAAACATGGAATGTTTTTGGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- TAGAGAAAACATGATGATTACACCCTAAAACATGGAATGTTTTTGGGTGA
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> TGGAGAAAACATGATGATTACACCCTAAAACATGGAATGTTTTTGGGTGA
CT0137583      --> ............................AACATGGAATGTTTTTGGGTGA
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               501    -    551
RU26770        --> TGATGGTGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- TGATGATGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
CT0031531      <-- ......TGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
CT0039478      <-- ......TGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
CT0041442      <-- ......TGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
CT0108579      <-- .................................................C
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> TGATGGTGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
CT0137583      --> TGATGGTGGTGGATTAGTGTGAGTAATGATGGAGAAAACATGATGATTAC
ET0144112      --> .................................................C
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               551    -    601
RU26770        --> ACTCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0031531      <-- ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0039478      <-- ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0041442      <-- ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0108579      <-- ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0027457      <-- ...............................ATGATGGTGGATTAGTGTG
CT0041622      <-- ........................................GATTAGTGTG
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ACTCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0137583      --> ACTCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
ET0144112      --> ACCCTAAAACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
CT0024693      --> ........ACATGGAATGTTTTTGGGTGATGATGATGGTGGATTAGTGTG
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               601    -    651
RU26770        --> AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- AGTA..............................................
CT0031531      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0039478      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0041442      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0108579      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0027457      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0041622      <-- AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0055826      <-- ..TAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
ET0068462      <-- ..................taGATGATTACACCCTAAAACA-TGGAATGTT
ET0077720      <-- ..................taGATGATTACACCCTAAAACAATGGAATGTT
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0137583      --> AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
ET0144112      --> AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
CT0024693      --> AGTAATGATGGAGAAAACATGATGATTACACCCTAAAACA-TGGAATGTT
ET0042973      --> ..............AAACATGATGATTACACCCTAAAACA-TGGAATGTT
ET0001693      --> ..................................................

               651    -    701
RU26770        --> TTTTAGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- TTTa..............................................
CT0039478      <-- TTTa..............................................
CT0041442      <-- TTTa..............................................
CT0108579      <-- TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
CT0027457      <-- TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ATTT-CAA
CT0041622      <-- TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
CT0055826      <-- TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
ET0068462      <-- TTT-AGGTGATGATGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
ET0077720      <-- TTTAGGTTGATGATGGTGGTGGATTTT-CTTGCTCATTTTT-ACTTTCAA
CT0082383      <-- .......................................TT-ACTT-CAA
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> TTgga.............................................
CT0137583      --> TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
ET0144112      --> TTT-AGGTGATGGTGGTGGTGGATTTT-CT-GCTCATTTTT-ACTT-CAA
CT0024693      --> TTT...............................................
ET0042973      --> TTTTAGGTGATGGTGGTGGTGGATTTTTCT-GCTCATTTTTTACTT-CAA
ET0001693      --> ............................................TT-CAA

               701    -    751
RU26770        --> TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
CT0027457      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
CT0041622      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
CT0055826      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
ET0068462      <-- TTTTATCTCCACCGAAAGTTTTAGATTCTGCCCGTGACTTCTTCAGATGA
ET0077720      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGCCCGTGACTTCTTCAGATGA
CT0082383      <-- TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
CT0092554      <-- ........CCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
ET0144112      --> TTTTATCTCCACCGAAAGTTT-AGATTCTGT...................
CT0024693      --> ..................................................
ET0042973      --> TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA
ET0001693      --> TTTTATCTCCACCGAAAGTTT-AGATTCTGTCCGTGACTTCTTCAGATGA

               751    -    801
RU26770        --> AATGATCTACCATGAGTGTAGATCATTCTGT-C-AAATTTT-CAGAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- AATGATCTACCAT.....................................
CT0027457      <-- A.................................................
CT0041622      <-- AATGATCT..........................................
CT0055826      <-- AATGATCTACCATGAGTGTAGATAATTCTGT-C-AAATTTT-CAGAATTT
ET0068462      <-- AATGATCTACCATGAGTGTAGATCATTCTGT-C-AAATTTT-CAGAATTT
ET0077720      <-- AATGATCTACCATGAGTGTAGATCATTCTGT-C-AAATTTT-CAGAATTT
CT0082383      <-- AATGATCTACCATGAGTGTAGATCATT.......................
CT0092554      <-- AATGATCTACCATGAGTGTAGATCATTCTGT-C-AAATTTT-CAGAATTT
CT0008073      <-- .....................ataATTCTGT-C-AAATTTT-CAGAATTT
ET0092763      <-- ...............................................TTT
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> AATGATCTACCATGAGTGTAGATCATTCTGT-Ctaa..............
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> AATGATCTACCATGAGTGTAGATAATTCTGTACTAAATTTT-CA......
ET0001693      --> AATGATCTACCATGAGTGTAGATAATTCTGT-C-AAATTTTTCAGAATTT

               801    -    851
RU26770        --> ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
ET0068462      <-- ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
ET0077720      <-- ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
CT0082383      <-- ..................................................
CT0092554      <-- ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
CT0008073      <-- ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA
ET0092763      <-- ATTTCCATTTATTTTGGGCCAGAATCTCTGCTAGACTCCTTACAGGTCCA
CT0012239      <-- ..................................................
CT0025926      <-- ..................................................
CT0054390      <-- ..................................................
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ATTTCCATGTATTT-GGGCCAGAATCTCTGCTGGACTCCTTACAGGTCCA

               851    -    901
RU26770        --> GTTTTCTAGTTTTGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- GTTTTCTAGTTT......................................
ET0068462      <-- GTTTTCTAGTTTTGCCTCTGCTG...........................
ET0077720      <-- GTTTTCTAGTTTTGCCTCTGCTG...........................
CT0082383      <-- ..................................................
CT0092554      <-- GTTTTCTAGTTTTGCCTCTACTGAAAATTGGGCTGACTGTTTG.......
CT0008073      <-- GTTTTCTAGTTTTGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
ET0092763      <-- GTTTTCTAGTTTTGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
CT0012239      <-- ............TGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
CT0025926      <-- ............TGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
CT0054390      <-- ............TGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> GTTTTCTAGTTTTGCCTCTGCTGAAAATTGGGCTGACTGTTTGAAGGCCT

               901    -    951
RU26770        --> TACACTTCTGTTTGGCCCTTGAACTCTTCATAAGAAATGTTTCTTAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- TCCACTTCTGTTTGGCCCTTGAACTCTTCATAAGAAATGTTTCTTAGGA.
ET0092763      <-- TCCACTTCTGTTTGGCCCTTGAACTCTTCATAAGAAATGTTTCTTAGGAT
CT0012239      <-- TACACTTCTGTTTGGCCCTTGCACTCTTCATAAGAAATGTTTCTTAGGAT
CT0025926      <-- TACACTTCTGTTTGGCCCTTGCACTCTTCATAAGAAATGTTTCTTAGGAT
CT0054390      <-- TACACTTCTGTTTGGCCCTTGCACTCTTCATAAGAAATGTTTCTTAGGAT
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> TCCACTTCTGTTTGGCCCTTGAACTCTTCATAAGAAATGT..........

               951    -   1001
RU26770        --> GGCTAGAATAGATCTGCAGAGTTTCAGCTCATTTCGAGTTCATTTGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- GGCTAGAATAGATCTGCAGATTTTCAGCTCATTTgaaa............
CT0012239      <-- GTCTAGAATATATCTGCAGAGTTTCAGCTCATTTCGAGTTCATTTGGTCA
CT0025926      <-- GTCTAGAATATATCTGCAGAGTTTCAGCTCATTTCGAGTTCATTTGGTCA
CT0054390      <-- GTCTAGAATATATCTGCAGAGTTTCAGCTCATTTCGAGTTCATTTGGTCA
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               1001   -   1051
RU26770        --> GGCGTCCGCTCCTTCTTCCTTGCTTAGCTCACTTTCTTTTCTCCATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053731      <-- ..................................................
CT0000153      <-- ..................................................
ET0144319      <-- ..................................................
CT0055185      <-- ..................................................
CT0076789      <-- ..................................................
ET0034975      <-- ..................................................
ET0036514      <-- ..................................................
CT0099338      <-- ..................................................
CT0031531      <-- ..................................................
CT0039478      <-- ..................................................
CT0041442      <-- ..................................................
CT0108579      <-- ..................................................
CT0027457      <-- ..................................................
CT0041622      <-- ..................................................
CT0055826      <-- ..................................................
ET0068462      <-- ..................................................
ET0077720      <-- ..................................................
CT0082383      <-- ..................................................
CT0092554      <-- ..................................................
CT0008073      <-- ..................................................
ET0092763      <-- ..................................................
CT0012239      <-- GGCGTCCGCTCCTTCTTCCTTGCTTAGCTCACTTTCTTTTCTCCATTATT
CT0025926      <-- GGCGTCCGCTCCTTCTTCCTTGCTTAGCTCACTTTCTTTTCTCCATTATT
CT0054390      <-- GGCGTCCGCTCCTTCTTCCTTGCTTAGCTCACTTTCTTTTCTCCATTATT
CT0020320      --> ..................................................
CT0100761      --> ..................................................
ET0009220      --> ..................................................
ET0022759      --> ..................................................
ET0038434      --> ..................................................
ET0054444      --> ..................................................
ET0055094      --> ..................................................
CT0090721      --> ..................................................
CT0095341      --> ..................................................
CT0097057      --> ..................................................
ET0080959      --> ..................................................
ET0139103      --> ..................................................
CT0137583      --> ..................................................
ET0144112      --> ..................................................
CT0024693      --> ..................................................
ET0042973      --> ..................................................
ET0001693      --> ..................................................

               1051   -   1101
RU26770        --> TCCTAACATGATAAGA
                   ~~~~~~~~~~~~~~~~
CT0053731      <-- ................
CT0000153      <-- ................
ET0144319      <-- ................
CT0055185      <-- ................
CT0076789      <-- ................
ET0034975      <-- ................
ET0036514      <-- ................
CT0099338      <-- ................
CT0031531      <-- ................
CT0039478      <-- ................
CT0041442      <-- ................
CT0108579      <-- ................
CT0027457      <-- ................
CT0041622      <-- ................
CT0055826      <-- ................
ET0068462      <-- ................
ET0077720      <-- ................
CT0082383      <-- ................
CT0092554      <-- ................
CT0008073      <-- ................
ET0092763      <-- ................
CT0012239      <-- TCCTAACATGATAAGA
CT0025926      <-- TCCTAACATGATAAGA
CT0054390      <-- TCCTAACATGATAAGA
CT0020320      --> ................
CT0100761      --> ................
ET0009220      --> ................
ET0022759      --> ................
ET0038434      --> ................
ET0054444      --> ................
ET0055094      --> ................
CT0090721      --> ................
CT0095341      --> ................
CT0097057      --> ................
ET0080959      --> ................
ET0139103      --> ................
CT0137583      --> ................
ET0144112      --> ................
CT0024693      --> ................
ET0042973      --> ................
ET0001693      --> ................