Member Information |
| AAATGTCTCCTCTTCAGAAACAGTACTACAAGTGGATTTTGGAGCGCAACTTCCATAACTTGAACAAAGGAGTTCGTGGGAA TCAGGTTTCATTGTTGAATATTGTAGTAGAGTTGAAGAAATGCTGTAATCATCCCTTCCTTTTTGAAAGTGCTGACCATGGT TATGGTGGGGACTCAAGCAGTAAAGATGGCAGTAAATTAGGAGAAGAAGTTAAATTTT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 3 | 0 | 0 | 0 | 3 |
| Probe ID | Probe Sequeces |
| yueji_07474 | AGTTATGGAAGTTGCGCTCCAAAATCCACTTGTAGTACTGTTTCTGAAGAGGAGACATTT bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AAZ32872 | putative chromodomain-helicase-DNA-binding protein [Medicago sativa] | 337 | 2e-030 |
| CAO16828 | unnamed protein product [Vitis vinifera] | 328 | 2e-029 |
| BAD94038 | pseudogene [Arabidopsis thaliana] | 322 | 1e-028 |
| AAD28668 | putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] | 322 | 1e-028 |
| EAZ05015 | hypothetical protein OsI_026247 [Oryza sativa (indica cultivar-group)] | 318 | 3e-028 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 | 187 | 3e-014 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 | 187 | 3e-014 |
| Q12873 | Chromodomain-helicase-DNA-binding protein 3 | 186 | 4e-014 |
| Q8TDI0 | Chromodomain-helicase-DNA-binding protein 5 | 177 | 4e-013 |
| O14646 | Chromodomain-helicase-DNA-binding protein 1 | 172 | 2e-012 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7PQX9 | Chromosome chr6 scaffold_25, whole genome shotgun sequence | 286 | 1e-024 |
| B9HP20 | Chromatin remodeling complex subunit | 286 | 1e-024 |
| B9SYQ4 | Chromodomain helicase DNA binding protein, putative | 286 | 1e-024 |
| Q9SI41 | Putative chromodomain-helicase-DNA-binding protein | 286 | 1e-024 |
| B8B5J6 | Putative uncharacterized protein | 283 | 3e-024 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT2G13370.1 | CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding | 286 | 8e-027 |
| AT3G06400.1 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | 145 | 2e-010 |
| AT5G18620.1 | CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | 143 | 3e-010 |
| AT5G18620.2 | CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | 143 | 3e-010 |
| AT5G19310.1 | homeotic gene regulator, putative | 119 | 2e-007 |
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