RU01394 sequence (1085 bp)


Member Information
GCACGAGGAACTAACAAACACTCGCAGCCCCCTCCCTCATTTCTCTGAGAGACATAGAGAGAGAGAGAATATTAAATAGAAA
TAGATAAACCGGAAAACCAACGACCACCAGCATCGGAGCTAGAGCAATATGTGGCGGTGCGTTTCTCGGCGACTCGGCGTTT
CTTCGTCCCAAAGATCAATCGCAGCCAATGACTGCCTTAGATCTCACTTCTCCAGACTCTTCTCCACTGAATCGGCTACAGG
ACGCTCGTCTTATACTGTGGTGGATCATACTTATGATGCCGTGGTGGTTGGGGCAGGCGGTGCAGGGCTGAGAGCAGCCATA
GGACTTTCGGAGCATGGATTTAATACCGCTTGCATTACTAAATTGTTCCCTACGCGTTCACACACTGTCGCGGCTCAGGGTG
GTATAAATGCTGCATTAGGGAATATGACTGAGGATGACTGGAGGTGGCACATGTACGACACAGTGAAGGGAAGTGATTGGCT
GGGTGATCAAGATGCCATCCAGTATATGTGTAGAGAGGCTCCAAAAGCTGTGATTGAACTTGAAAATTATGGGTTACCCTTT
TCTCGGACTGAAGAAGGAAAAATATATCAGCGTGCATTTGGTGGTCAAAGCCTTGACTTTGGAAAAGGTGGACAGGCATACC
GTTGTGCTTGCGCTGCCGACAGAACTGGGCATGCTCTTTTGCATACTCTCTATGGACAAGCTATGAGGCATAATACACAGTT
TTTTGTCGAATATTTTGCGCTGGATCTTATAATGAACAGTGACGGGAGCTGTCAAGGAGTTATTGCATTAAACATGGAGGAT
GGGACTTTGCATCGGTTCCAAGCTTCATCGACAATATTGGCCACGGGGGGTTATGGTAGAGCATACTTCTCTGCAACCTCGG
CACATACCTGCACTGGAGATGGCAATGGCATGGTGGCACGTGCTGGGCTCCCACTTCAGGATTTGGAGTTTGTGCAGTTTCA
CCCTACTGGTATATATGGAGCTGGATGCCTCATTACTGAAGGATCACGAGGGGAAGGTGGTATCCTTAGAAACAGTGAAGGT
GAGCGATTTATGGAACGAT


RU01394 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
650112

Probe ID Probe Sequeces


RU01394 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_201477 SDH1-1 (Succinate dehydrogenase 1-1) [Arabidopsis thaliana] 1525 2e-167
NP_179435 SDH1-2 (Succinate dehydrogenase 1-2) [Arabidopsis thaliana] 1461 6e-160
ACG43057 unknown [Zea mays] 1456 2e-159
NP_001058845 Os07g0134800 [Oryza sativa (japonica cultivar-group)] 1455 3e-159
EAZ02687 hypothetical protein OsI_023919 [Oryza sativa (indica cultivar-group)] 1442 9e-158

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O82663 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial 1439 1e-158
Q9ZPX5 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial 1375 4e-151
Q6ZDY8 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 1369 2e-150
Q9UTJ7 Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 1199 1e-130
Q801S2 Succinate dehydrogenase [ubiquinone] flavoprotein subunit B, mitochondrial 1152 3e-125

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9MXP7 Predicted protein 1459 9e-160
B9HEW3 Predicted protein (Fragment) 1454 3e-159
B9SWW3 Succinate dehydrogenase, putative 1386 3e-151
B6U124 Succinate dehydrogenase flavoprotein subunit,mitochondrial 1370 2e-149
B8A372 Putative uncharacterized protein 1370 2e-149

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G66760.1 SDH1-1; ATP binding / succinate dehydrogenase 1439 1e-159
AT2G18450.1 SDH1-2; succinate dehydrogenase 1375 4e-152
AT5G14760.1 AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductase 300 2e-027