RU01784 sequence (1324 bp)


Member Information
TTTTTATTAAAGTAAATTATTGTTTAAAGGGGTTACTAGTATTGTAAAGTAAACTAGTTCTAGTATTTACTAGACCAAAAGT
GTTGAGGAAAAACCGTAAACATTACCGGCATCAAGTATCTTAACGAAAAGGAAAGAGACTTAATCAAGATCAGATAGGTGGT
GACCGTGATTAAGCGTTTTACTTGAACATAAAACAACATTTATGTAGAGCAGAGTAGCTTTACTGTTTGCAGTTCAGTATTA
TTCTGAGCTCCTATTTGAATTCAACATGAACATGAGGCTGGGATAAGTCATGTGTACTTCTTCACTTCCATGCTGCAGCCAC
TAATGATCAGATGGTGACTGCTGCTGTTGCTGCTGCTGCTCCGGTGCCTGCGGCCACATTTGCGGAGCCATGTAGGGGTGAG
ACTGTTGCCCGTACATAGATGGGTCCATCATAGGCTTGCCCATGATCATCCCAGGAGCCCCCACCTGAGGTCCATGCTGAGG
TGGCATATAGCAGTATGGAGGAAGTGCATCAGCAGCCCCAACAGAAACCGTTCCCCTTGGAATGGATGCAAGGACTTCATCT
TTCAGATCCTCTCTCGGCACGATGTCTACCAAGAAATCAAAGATATCAGTCCTTGTGATTGCAGCTGCAATGTCATTCTTTT
GAAGTGTCCTCCTTTTATTCTCTTCTGTGTGATTCCAAGACCGCAAGGTCAACTCCAAGATGAACATTTCACATGCCCTTGC
AAAGATCACAGGTGCCTCAGCTGATATCATTCTCACATCCTCATCAGCTTTCATAATCTTCTTGATCCTTGCTAGAGGAAGG
CTATGGTCCTTGAAATCAGTTACCTTCTCAATCTCTTGAAACTGATTTGCCCAGAAACTTTGCAGTTGTTGTTGAAGTTGTT
GCTGCTGCTGCTGGTGAATGTGCCGATAAGCAAGTTGATGCTGTTGAAGCTGAGCTCCGGCAGATTGACTACTAGATTGAAT
GCCTCCAACTGGCGCACCAACTGTAGCAGGATTCGGACTCCCTACCATTTGAGTATGCTGATACGGAGCAGTCCCATATGCC
AATTGAGCTCCACTACCTACCATCCCCATAGATTGGGGTTGCCCATGTCCTTGCTGATCCATCCAGTTCCTTTTTCACAAAC
AGGGGATGCTCTGCTACGCAAAATCGATTTCGAACCTGAAAAAAAGAGAGAAAATTCTTTCAGAAAAAATAAAAAACTGGAA
GAAATATTCACCTGGGCATTAACAAGTATTGGGTTTCAAAAAGACTGAAACTTTCATTGTTTTTCTGTTCTGGGAAATTTTT
TTGTAAGGCAAA


RU01784 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
964019

Probe ID Probe Sequeces
yueji_10852CAACACTTTTGGTCTGTAATCTGACTGAACTAGTTTACTTTACAATACTAGTAACCCCTT bl2seq


RU01784 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
ABD32395 Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula] 1039 6e-111
BAG16521 putative CONSTANS interacting protein 2b [Capsicum chinense] 892 7e-094
ABB17001 unknown [Solanum tuberosum] 879 2e-092
CAN61083 hypothetical protein [Vitis vinifera] 855 1e-089
AAS67370 CONSTANS interacting protein 2b [Lycopersicon esculentum] 831 8e-087

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q8L4B2 Nuclear transcription factor Y subunit C-9 602 2e-061
Q9ZVL3 Nuclear transcription factor Y subunit C-3 576 2e-058
Q9SMP0 Nuclear transcription factor Y subunit C-1 507 2e-050
Q9FMV5 Nuclear transcription factor Y subunit C-4 505 4e-050
Q8LCG7 Nuclear transcription factor Y subunit C-2 499 2e-049

TrEMBL top hits
Blast detail
Accession No. Description Score e value
Q2HTM1 Histone-fold/TFIID-TAF/NF-Y 822 9e-086
B9HME0 Predicted protein 802 2e-083
B9I7W0 Predicted protein 797 7e-083
B7FI76 Putative uncharacterized protein 761 1e-078
B9MZT8 Predicted protein 752 1e-077

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G08970.4 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor 602 2e-062
AT1G08970.1 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor 602 2e-062
AT1G08970.3 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor 602 2e-062
AT1G08970.2 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor 602 2e-062
AT1G54830.2 NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor 576 2e-059