RU01884 sequence (1398 bp)


Member Information
CTTTGATTTGGGCTGTGAAATTGGGTTTCTTGACAACCAAGGCTCCGGTGGTGGTTCGAGTTTGATGAACAGGGGAGGTGGG
GTTTTAACCGGGTTCAATGATTTGAGCTCCAACACCCACATGCAGGCTCAGAATCTGTGCTCCAATTTGCAATTCTCAACCA
CCCGTTTGCCTCATTTGCTTGAGAATGGTAATAATTTTTCGGGTTTTCGGGGTGTTGATGATACTTCAGGCAATGCTTTGTT
TAGCAATAGGTCTAAAATGTTGAGACCCCTCCAGCCCTTATCTTCTGTGGGAGCACAGCCGACTCTTTTTCAGAAAAGGGCG
GCGCTGCGGAAGAATTTGGGTGGACTGGGATCCGAGGGGGGACTGGTCTTGAGTAACTATGAAGGGGATAAGGGGAAGAGGG
ACATGGGGGAAGAGAATGAGAAGAAGAGGAAGTTTAGTGGTGGAGATGATGGCGAAGATTTGAGTTTCGATGGCTCGGGTTT
GAACTATGATTCAGATGAGTTTACTGAGAATACTAAGATGGATGAGAATGCCAAGAATGGTGGCAATAGCTCCAATGCTAAT
AGTACTGTTACCGGTGGGGAGCACAAGGGGAAGAAGAAAGGGTTGCCTGCTAAGAATCTGATGGCTGAGAGGCGCCGCCGGA
AGAAGCTCAATGATCGGCTGTATATGCTGAGATCCGTTGTTCCAAAGATCAGCAAAATGGATAGGGCTTCTATCCTTGGGGA
TGCAATTGAGTACTTGAAAGAACTTCTGCAGAGGATCAACAACCTCCATAACGAATTGGAGTCGCTCCCTCCCGGGTCTGCA
TTGACACCTACCGCAAGTACTTTTCATCCTTTGACACCCACTCCACCTACTCTGCCTAGCCGTATTAAGGAAGAGCTTTGCC
CCAGCTTACCTAGCCCGAATGGCCAACCTGCAAGGGTTGAAGTAAGGCTACGAGAAGGCAGAGCTGTGAACATCCACATGTT
CTGTGGCAGAAGACCTGGTCTCTTGCTCTCCACTATGAGGGCTGTAGATAATCTTGGTTTAGACATCCAGCAAGCTGTCATT
AGCTGCTTCAATGGGTTTGCCATGGATATATTCCGGGCTGAGCAATGCAAGGAAGGTCAAGACGTCCACCCTGAGCATATAA
AGGCAGTACTTTTGGATTCAGCTGGGTTCCATGGCATGATATAGGTTGCAGCAGAACAACAAACTGAAGTTGCTTTACCAAG
ATAGGAGAGGAGTCGTGCAATTTCTCCACCATGTTTTGCTAGCCAAAGCTCAACTGTGCCATCATCACATTTTAATTTAGCA
GCTATTGAAGAAACTTTGTAGGTTTGCTTTGTATCATGGAAATTCAGGTTCTTGGTGCCACTGCCACCTGAATTGAGTGAAA
GTTT


RU01884 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10200333

Probe ID Probe Sequeces
yueji_05755CTTTGTATCATGGAAATTCAGGTTCTTGGTGCCACTGCCACCTGAATTGAGTGAAAGTTT bl2seq
yueji_12421CTGCGGAAGAATTTGGGTGGACTGGGATCCGAGGGGGGACTGGTCTTGAGTAACTATGAA bl2seq


RU01884 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
ABS50251 bHLH transcriptional factor [Malus x domestica] 1712 6e-189
CAO68378 unnamed protein product [Vitis vinifera] 1455 4e-159
CAN67898 hypothetical protein [Vitis vinifera] 1442 1e-157
CAO49090 unnamed protein product [Vitis vinifera] 1203 7e-130
CAN62843 hypothetical protein [Vitis vinifera] 1080 1e-115

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q9LSE2 Transcription factor ICE1 820 1e-086
Q9LPW3 Transcription factor SCREAM2 766 2e-080
Q9LSL1 Transcription factor bHLH93 252 9e-021
Q9LXA9 Transcription factor bHLH61 241 2e-019
Q9ZVX2 Transcription factor ABORTED MICROSPORES 227 7e-018

TrEMBL top hits
Blast detail
Accession No. Description Score e value
B2BF97 BHLH transcriptional factor 1467 2e-160
B9I3Y8 Predicted protein 1297 8e-141
B9RA76 Transcription factor ICE1, putative 1289 7e-140
A3FM76 Inducer of CBF expression 1 1269 1e-137
A7PHQ4 Chromosome chr17 scaffold_16, whole genome shotgun sequence 1260 2e-136

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT3G26744.1 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor 821 9e-088
AT3G26744.2 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor 821 9e-088
AT3G26744.4 ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor 821 9e-088
AT1G12860.1 SCRM2 (SCREAM 2); DNA binding / transcription factor 767 2e-081
AT5G65640.1 bHLH093 (beta HLH protein 93); DNA binding / transcription factor 252 9e-022