RU02089 sequence (2298 bp)


Member Information
CAACGGCAGCAAGCATAAATTTCATAGTTTTCCTAAGAAAGGAAAGTGGAAATGTTACATTGATAGCAAATTATTTACATCG
CATTAACATATTCGCCATCAATCAATAACCCTATTATACAAAGTGCAAATTTGGGTCCTTGCTAACATAAATGGTACAAAGG
AGAAACAAATTAAGTACAAACCAATAACTTAAGACCCAAATGCATTTTTTGTACAATGTTAAGCAACATAATTTTCTGAGCT
GCGGAAAATTTCATTGGCATGGGCTGCTGGCACATAAACTGCATCTTGCAGTGAGCTGTGTGTTCGGCCATAAAATACATAA
ACCAACACTCCAATTATCAGCCATACAGTAACACGAGCCCAGGTGTCACCTCCAAGATTGATGAGTAAGTAGACGTTGATGA
GAATACAGATGATTGGAAGCAATGGAACAAATGGGCATATGAAACCTCCTGTGTGCCCAAAGCTGTGCCGTGCATCATCTTG
ATCTATACAAGTAAGCACAATCAGACCAAATAGAACAAGGATACCACCAACTCCACATACTGCATAGCGAAGAAAGCTGGGG
AGGCCCAAACTTGAAGCTGAATATGTCAGGAGAAACACCCCTACACATGTGAACATTATGGTCCAGCCAGCTAATTTTTCGC
CTGTTATCTTCACTTAGTGTGTAGTTAACAAGGGGTAGTTGCTTTTCAATCAGAGGAAGTTCAACCAAGATATCCACTGTGT
CAAGTAGAGGTTTAGAAATATCTTTGGAAGACCCAACACTACCCTTAGGATCATCCCCACTGATATCTTGAGAATTACTACC
ATGCCGCAAGGAGACTGAATCAATGGAATCCTGCAGAGATGCAGGCAAAGGCACCTCATCCGGTGGGACATATCTGAGTATA
AGTACAGATATTGCTACCATAGTGAATGCAACAAGTGTACCCACACTAACCATTCCTGCTAACTGTGAAACATCCATGAAGA
ATGCCAAGGTTGCAGCACCAATCCCAGTTGCTATTGTACTCTTGACAGGGACCTGAGTGCTTTTATTAATCTCCGAGAAAAA
TGGCGGTAGCAATCCATCTCTAGCCATTGCCATCAGAATTCGCGGCTGCGGAAGAATAGACCCCATCAATGTCGAGCAGAGA
GCAGTAACAGCTCCAACAGTAATGATATAGGCAGCCCATTGCATCCCATGGCTAGCAAATGCAGTAGAGATGGGCGTGTCAG
GATCCATTGCATGATAAGGCACTAAACCAACAATGACCATGGAAACCAACATATACAATGCACAGCATATAGATAGTGCAGC
ACCAATACCCAGTGGTAAATCTCGTTGGGGATTCTTCACCTCTTCAGCAGTGCTTGCAACTGAATCAAAACCAATGTAAGCA
AAGAAGACAGTTGCAGACCCGGCAAGCATACCATTCACCCCAAAGGGGAAGTACCCAGTAGGAAGTTGATATCCAGACCAGC
CAGTCTTAAATCCCAAATAAGTACCAGCAACTATGACAAATAACATTGCACATACATTCGCTATCGTCGCAATGCCTTGTGC
CACTGTACTCTCCTTGATTCCCACACACAGGAGCCCTGTGACAATAAATACTAGAATGGCTGCGCATGGGTCAACCATAATA
TCAAGCGCAGGAATGTATTGACGGGCTAGAAAAACAGGCAGACTGTCTGCTCCTCCAAAGAGTAATGCCAGATTAGGGGAGA
TGCCACGAGCAACAGCCGAACCGCCAATGGTATATTCGAGAATCAAAGCCCAACCAACCAACCAAGCAACACCTTCTCCAAT
GCATATGTAGGTGTAGTGATAGGCGCTTCCGGCGGAGGGGCAACGACTTGCAAGCTCGGCATAACAAAAGGCCGAAAGGGCG
GCGGCGATTCCGGCAATGAGAAAGGAAATAGTGAGGGCTGGTCCAGAATGCTCTCTGGCAACTGTTCCAACGAGAATATACA
CTCCCGCTCCGATTGTTGAGCCCACACCAATCGCAACGAGATGGGGAACAGTCAACTCCCTGGCCAATTGATGATGAGCCTT
GCGGTGAACGGAATCGACCTGCTTCCTCCGAATCAGACTATTACGAGCACCACCAGCAGCAGCACCCCATTGTTTTGCACCA
TCTGGCGACTGCGAATCAAACCCCATCCAATTCCCTTGTTATGATATGCTATCTATCTATCTATCTATGACTATTATATGTA
CAATTCTGCCCGCACTTCCCCTTTTATTTCCCCACACAACTGGAACTGATTTGATTGGGAAAGCGGGCAGATTACGCCTCGT
GC


RU02089 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
30290160

Probe ID Probe Sequeces
yueji_02893TATCATTACTGTTGGAGCTGTTACTGCTCTCTGCTCGACATTGATGGGGTCTATTCTTCC bl2seq
yueji_11565TTAATCTCCGAGAAAAATGGCGGTAGCAATCCATCTCTAGCCATTGCCATCAGAATTCGC bl2seq


RU02089 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_849822 CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid transmembrane transporter [Arabidopsis thaliana] 1904 6e-211
AAN17434 Unknown protein [Arabidopsis thaliana] 1898 3e-210
CAO67511 unnamed protein product [Vitis vinifera] 1784 5e-197
ACG43321 unknown [Zea mays] 1750 5e-193
ABA99422 amino acid permease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] 1749 6e-193

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q797A7 Uncharacterized amino acid permease yfnA 753 1e-078
Q8BXR1 Probable cationic amino acid transporter 737 1e-076
Q8BLQ7 Cationic amino acid transporter 4 734 2e-076
O43246 Cationic amino acid transporter 4 727 1e-075
Q8TBB6 Probable cationic amino acid transporter 725 2e-075

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9I635 Cationic amino acid transporter 1932 3e-214
B9IPU4 Cationic amino acid transporter 1931 4e-214
B9SI71 Cationic amino acid transporter, putative 1927 1e-213
A7QRK1 Chromosome chr8 scaffold_150, whole genome shotgun sequence 1901 1e-210
Q9ASS7 At1g58030 1857 2e-205

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G58030.1 CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid transmembrane transporter 1857 1e-207
AT5G36940.1 CAT3 (CATIONIC AMINO ACID TRANSPORTER 3); basic amino acid transmembrane transporter/ cationic amino acid transmembrane transporter 1692 2e-188
AT3G03720.1 CAT4 (CATIONIC AMINO ACID TRANSPORTER 4); cationic amino acid transmembrane transporter 1593 5e-177
AT3G03720.2 CAT4 (CATIONIC AMINO ACID TRANSPORTER 4); cationic amino acid transmembrane transporter 1593 5e-177
AT1G05940.1 CAT9 (CATIONIC AMINO ACID TRANSPORTER 9); cationic amino acid transmembrane transporter 684 1e-071