Rose Transcriptome Database
RU02092 sequence (921 bp)
ATCGAAAACACACGCTTTTATTGCTCGATAAGAATACCTTAACAAAGACGCGTCAGGATATGACCAAAAGGCCCTCGACCCC
ATGATTCCACCCAACACCAGCACACACACAAACAAACAAACAACAAAACCAAACTAAACGACAACAACCCGAAACCAAACAA
ACAAATCCTTAACGGGTCTTACATCTCCGTGACCCCAGTAGCTTCAGCTCATCTGTAGGAGCCACTCAGAGCTCGACAAGTA
ATCCCCCTCTTTATTTGGATAATAAAGACCTATTAAAAAGTAAAAACCACGCGCCACACGAACTGACTTAGATTGCGAGGAC
CAGACCCGGAACCGACTTCCCGACCCGGTTGGAGCTCTCCCAGACGGAGGGGCAGTGGTACGATGTAATCTCGGACGTCGAT
TTGGAGAACTTGGGTTTGGCGGAGCTGGTGGAGTTCCCGAGGCGGGTGACGGTGAGGGAAGTGTTGAAGTACTCCCTGACCT
GGGTGATTATCCCATCCGTGACGGTCCAGGCGTGTACCCAGGAGATCTCCTGCTCTGGGTCACAGCCCTCCACTAGGACGAC
GGGGCCGACGGAGCAAATAGACTGGGGATTGAACTGAAACGACGCGTCGTTCTTGTTGTCGCAGCCGGTCAGCAGGCGCTTC
AAGAACTGGTGGGTCGGCGGACCATGGAACCACCACTCGAGGTCGGCGGCGAGGACGGCGTGCACGGTGGCCACGTCACGGG
TGCTCAAGGCGTCATAGAGTTTCAGAACCAGCCGGTGATTGCTGGAATCGGAAGAAGAATCGTCGGTTTCTTGAGATAACGC
CAGTTCTAGCCTAAGCCCACCGAGGCGGGTGCTCAATATAGAGAGAGAGGAGATTTGAGTAATGGGGGAAGATGAATGTGAA
GAGAAGAGAGAGAGAGAGT
|
RU02092 Expression
| Control | Ethylene | WDS | GenBank | Total |
|---|
| 27 | 20 | 1 | 0 | 48 |
| Probe ID |
Probe Sequeces |
| yueji_11464 | TATCCTGACGCGTCTTTGTTAAGGTATTCTTATCGAGCAATAAAAGCGTGTGTTTTCGAT bl2seq |
RU02092 Annotation
| Accession No. |
Description |
Score |
e value |
| AAF01523 |
unknown protein [Arabidopsis thaliana] |
446 |
2e-042 |
| AAD23999 |
wound-induced protein WI12 [Mesembryanthemum crystallinum] |
338 |
7e-030 |
| BAB13711 |
elicitor inducible protein [Nicotiana tabacum] |
309 |
2e-026 |
| NP_974279 |
SAG20 (WOUND-INDUCED PROTEIN 12) [Arabidopsis thaliana] |
289 |
3e-024 |
| CAO21356 |
unnamed protein product [Vitis vinifera] |
284 |
1e-023 |
| Accession No. |
Description |
Score |
e value |
| P20144 |
Wound-induced protein 1 |
251 |
7e-021 |
| Accession No. |
Description |
Score |
e value |
| B9S498 |
Putative uncharacterized protein |
541 |
2e-053 |
| Q9SRK9 |
Putative uncharacterized protein F9F8.20 |
439 |
1e-041 |
| B9S499 |
Putative uncharacterized protein |
429 |
2e-040 |
| B9HHX0 |
Predicted protein |
388 |
1e-035 |
| B9HYI8 |
Predicted protein |
377 |
2e-034 |
| Accession No. |
Description |
Score |
e value |
| AT3G10985.1 |
SAG20 (SENESCENCE ASSOCIATED GENE 20) |
298 |
2e-027 |
| AT5G01740.1 |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: SAG20 (SENESCENCE ASSOCIATED GENE 20) (TAIR:AT3G10985.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
242 |
7e-021 |