RU02186 sequence (1802 bp)


Member Information
TGTCGAGCGTCTTTTGGGTGAAGATGGCGCAAGCTCAGGTTCAGGGTCAGAATGCGAACGCGGCGGCGGCGGCGGCTGCTGC
TGCGGCGGCTAATGGTGGTGGGGCCAACCAGTTCGTGACGACGTCGCTTTACGTTGGGGATCTCGACCAGAACATTACGGAT
TCGCAGCTGTACGACCTGTTCAACCAGCTGGGTCAGGTCGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACCCGGAGGTCGC
TTGGTTACGGCTATGTCAATTATAGCAACCCGCAGGATGCTGCTAGGGCATTGGATGTGTTGAACTTCACTCCTGTAAATGG
GAGGCCCATTAGGATCATGTACTCTCACCGTGATCCTAGTATTCGTAAAAGTGGGTCTGGAAATATATTTATTAAGAATTTG
GACAAAGCTCTTGATCACAAAGCCTTGCATGATACATTTTCTTCATTCGGAAACATCCTTTCTTGCAAGGTGGCAACAGACT
CCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGAAGAAGCTGCCCAAAAAGCTATTGCGAAGTTGAATGG
TATGCTTATAAATGATAAGCAAGTTTTTGTAGGACCATTCCTCCGCAAACAGGAAAGGGAGGGTGTTGCTGACAAGTCAAAG
TTCCAGAATGTTTATGTGAAGAATCTATCAGAATCGACTACTGAAGATGATTTTACCAAAATTTTTGGTGAATTTGGACCAA
TCACTAGCGTAGTGATCATGAGAGATCAAGATGGAAAATCAAAGTGCTTTGGATTTGTCAACTTTGATAATCCAGATGATGC
TGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTGAA
AGGGAAAATGAATTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTA
AAAATTTAGATGATAGCATAGTTGATGATAAACTTAAGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCAT
GCGAGACCCCAACGGAGTAAGTAGGGGTTCCGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTGGCAGAG
ATGAATGGAAAAATGATTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGCTCCAGG
CTCAGTTTTCTCAAATGCGGCCAGTTGCAATGGCACCTTCAGTTGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCAGG
TATTGGACAGCAAATATTCTATGGTCAAGCCCCACCTGCTATCATTCCCTCCCAGCCTGGATTTGGATATCAGCAGCAGCTT
GTTCCTGGTATGAGACCTGGCGGCGCTCCCATGCCAAACTTCTTTGTGCCAATGGTTCAGCAGGGGCAGCAAGGGCAGCGCC
CTGGTGGCAGACGTGCAGGCCCTGCGCAGCAAAACCAGCAACCAGTTCCATTAATGCAACAGCAGATGCTTCCAAGAGGGCG
TATCTACCGTTACCCGTCTGGGCGCGCTCTGCCTGATGGTCCCATGCCTGGTGTTGGAGGCATGTTTTCTGTTCCATATGAC
TTGTCTGGCATGCCATTGCGTGATCCAGCACTGTCTCAGCCTGTTCCAATTGGGACTTTGGCTAGTGCCCTTGCAAATGCTA
CACCGGAGCAGCAAAGGACGATGCTTGGGGAAACTTTACCCACTGGTGGAACAGCTGGAACCTGACAATGCAGCGAAGGT


RU02186 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
20431064

Probe ID Probe Sequeces
yueji_11677TTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGC bl2seq


RU02186 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAN65906 hypothetical protein [Vitis vinifera] 2467 2e-276
CAN76464 hypothetical protein [Vitis vinifera] 2441 3e-273
CAO71896 unnamed protein product [Vitis vinifera] 2407 2e-269
AAF66823 poly(A)-binding protein [Nicotiana tabacum] 2371 3e-265
AAK30205 poly(A)-binding protein [Daucus carota] 2339 2e-261

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P42731 Polyadenylate-binding protein 2 1750 3e-194
O64380 Polyadenylate-binding protein 3 1306 8e-143
Q05196 Polyadenylate-binding protein 5 1254 8e-137
P31209 Polyadenylate-binding protein, cytoplasmic and nuclear 1144 5e-124
Q4P8R9 Polyadenylate-binding protein, cytoplasmic and nuclear 1126 6e-122

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9RYE9 Polyadenylate-binding protein, putative 2219 1e-247
B9GHB4 Predicted protein 2171 5e-242
Q9M549 Poly(A)-binding protein 2140 2e-238
A5BR81 Chromosome chr3 scaffold_8, whole genome shotgun sequence 2118 7e-236
A5B5N0 Chromosome chr18 scaffold_1, whole genome shotgun sequence 2096 2e-233

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G49760.1 PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor 1833 6e-205
AT4G34110.1 PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor 1750 2e-195
AT2G23350.1 PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor 1575 5e-175
AT1G22760.1 PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding / translation initiation factor 1306 7e-144
AT1G71770.1 PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor 1254 8e-138