RU02399 sequence (455 bp)


Member Information
TTTCCCTGGTGCGCGGCTCAGAAAAAAAAAAAACAGAGAGGATGGGGGAGCGATCTCCATTGGCGATCCTTTGGATTTCCGG
CTGGACATCCTCGTAAGTGATGACTGGAAGCTTGGATTTAAAGGATTTACGGTCAGTGGCGCCGCCGAGATAATAGCGTCGG
AGGTATTCGGTCTCGGCGTTTCGGCTGAGAATCTCGGCGAGCACCTTCTCCTGGACGGCGTCGGCGTTTCGGGTGGTTTGTT
CGATGTACTGCAAGGCCTTGGCGTCTTTCTCACAGGCCGGTGGCCCGAGGGGAGAAGGAAGGGACGAGTCAACTGCCATTGA
AGGAGAGACTGTGATTGCGTGTTTGGTACAAACAGCGATGAAATGAAAGGCGAGGAGGAGGAGGAGAAGAGAGATGGGGGAG
TAAAGTAAGTATGCTGTGTTTGCTGCGTGGGATTTAGGTGGAGTC


RU02399 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10012

Probe ID Probe Sequeces
yueji_05487TTTAAATCCAAGCTTCCAGTCATCACTTACGAGGATGTCCAGCCGGAAATCCAAAGGATC bl2seq


RU02399 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAN70815 hypothetical protein [Vitis vinifera] 405 2e-038
CAO71957 unnamed protein product [Vitis vinifera] 405 2e-038
NP_179101 GH3.1 [Arabidopsis thaliana] 403 3e-038
AAD32141 Nt-gh3 deduced protein [Nicotiana tabacum] 401 5e-038
AAS02074 auxin and ethylene responsive GH3-like protein [Capsicum chinense] 398 1e-037

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O82333 Probable indole-3-acetic acid-amido synthetase GH3.1 403 4e-039
Q9SZT9 Indole-3-acetic acid-amido synthetase GH3.2 315 6e-029
Q9LQ68 Indole-3-acetic acid-amido synthetase GH3.4 314 8e-029
O22190 Indole-3-acetic acid-amido synthetase GH3.3 313 1e-028
P0C0M2 Probable indole-3-acetic acid-amido synthetase GH3.2 278 1e-024

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9SG28 Indole-3-acetic acid-amido synthetase GH3.3, putative 406 1e-038
A5C238 Putative uncharacterized protein 405 2e-038
A7PLK7 Chromosome chr7 scaffold_20, whole genome shotgun sequence 405 2e-038
Q9XEY0 Nt-gh3 deduced protein 401 5e-038
Q6QUQ3 Auxin and ethylene responsive GH3-like protein 398 1e-037

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G14960.1 GH3.1 403 5e-040
AT4G37390.1 BRU6; indole-3-acetic acid amido synthetase 315 8e-030
AT1G59500.1 GH3.4; indole-3-acetic acid amido synthetase 314 1e-029
AT2G23170.1 GH3.3; indole-3-acetic acid amido synthetase 313 1e-029
AT4G27260.1 WES1; indole-3-acetic acid amido synthetase 270 1e-024