Member Information |
| CAACCAACAAGGAAGTGGATGCCCATATTCCTAACTACCCAAGCTTACCTCCACAACTTATCTGTCAACTCCACAATGTGAC AATGCATGCAGATGTCGAGACAGATGAAGTATATGCGCAGATGACCTTACAACCGCTAAATCCACAAGAGCAAAAGGACGGC TACCTTCCAGCAGGATTAGGCAGCCCTAACAAACAGCCTACAAATTATTTCTGTAAAACTTTGACAGCCAGTGACACTAGTA CCCATGGTGGTTTTTCTGTTCCTCGCCGGGCTGCTGAAAAAGTGTTTCCTCCATTGGACTTCTCCCAACAACCACCAGCACA AGAGTTAATTGCAAGGGATCTGCATGATAATGAATGGAAGTTTAGACACATATTTCGCGGCCAGCCCAAAAGGCATCTCCTT ACTACAGGGTGGAGTGTGTTTGTAAGTGCTAAAAGACTGGTTGCTGGAGATTCAGTTCTTTTCATCTGGAACGAAAAAAATC AACTACTCCTTGGTATCCGGCGAGCTAACAGACCACAAACTGTGATGCCTTCATCCGTTTTGTCAAGTGATAGCATGCACTT GGGACTTCTTGCCGCTGCAGCTCATGCAGCTTCAACAAATAGTCGTTTCACCATATTTTATAATCCAAGGGCTAGTCCATCA GAGTTTGTCATTCCCCTGGCCAAGTACATTAAAGCAGTCTATCATACTTGTGTTTCTGTTGGCATGCGTTTTAGGATGCTGT TTGAAACAGAGGAATCAAGTGTCCGCCGCTACATGGGAACCATAACTGGCATAAGTGACGTAGATGCTGCTCGTTGGCCTAA TTCACACTGGCGTTCAGTCAAGGTGGGCTGGGACGAATCCACAGCTGGGGAGAGGCAGCCAAGAGTGTCCCTGTGGGAGATT GAACCATTAACAACATTTCCCATGTATCCATCTCCGTTCCCCCTTAGGCTTAAGCGGCCATGGCCACCTGGACTACCCTCTT TTACTGGAATGAGGGAAGATGACCTTAGCATGAATACTCCACTTATGTGGCTTCGAGGAGATACTGGGGACCGTGGAATCCA ATCTCTGAGCTATCATGGCATTGGGGTCACTCCATGGATGCAACCAAGGCTTGATGTTTCTATGATTGGGTTGCAGACAGAC ATGTACCAGGCTATGGCTGCTGCTGCCCTTCAGGAGATGAGGGCTGTAGATCCTTCCAAATCGCTACATACGTCCCTTCTGC AGTTTCAGACCAAAACCCCAAAACCTCCCCAGCAGGTCTGCTGCCTTGATGCAC |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 10 | 7 | 2 | 0 | 19 |
| Probe ID | Probe Sequeces |
| yueji_04229 | TGTAAGTGCTAAAAGACTGGTTGCTGGAGATTCAGTTCTTTTCATCTGGAAACGAAAAAA bl2seq |
| yueji_08529 | AACTATCATGGCATTGGGGTCACACCATGGATGCAACCAAGGCTTGATGCTTCTATGATT bl2seq |
| yueji_13200 | ATGTCGAGACAGATGAAGTATATGCGCAGATGACCTTACAACCGCAAACCACAATCACAG bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO40364 | unnamed protein product [Vitis vinifera] | 2020 | 1e-224 |
| BAD19063 | auxin response factor 3 [Cucumis sativus] | 1976 | 1e-219 |
| CAO69961 | unnamed protein product [Vitis vinifera] | 1927 | 6e-214 |
| NP_174323 | ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor [Arabidopsis thaliana] | 1910 | 6e-212 |
| NP_001031115 | ARF6 (AUXIN RESPONSE FACTOR 6) [Arabidopsis thaliana] | 1910 | 6e-212 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q9ZTX8 | Auxin response factor 6 | 1815 | 5e-202 |
| A2YG67 | Auxin response factor 17 | 1742 | 1e-193 |
| Q653U3 | Auxin response factor 17 | 1742 | 1e-193 |
| A2X1A1 | Auxin response factor 6 | 1711 | 5e-190 |
| Q6H6V4 | Auxin response factor 6 | 1711 | 5e-190 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9T414 | Auxin response factor, putative | 1940 | 2e-215 |
| A7Q186 | Chromosome chr10 scaffold_43, whole genome shotgun sequence | 1925 | 1e-213 |
| Q6L8U1 | Auxin response factor 3 | 1881 | 1e-208 |
| A7PJQ8 | Chromosome chr12 scaffold_18, whole genome shotgun sequence | 1841 | 6e-204 |
| Q5IRX9 | ARF6 | 1815 | 6e-201 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G30330.1 | ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor | 1815 | 5e-203 |
| AT1G30330.2 | ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor | 1815 | 5e-203 |
| AT5G37020.1 | ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor | 1569 | 2e-174 |
| AT5G37020.2 | ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor | 1569 | 2e-174 |
| AT1G19220.1 | ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor | 1156 | 1e-126 |
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