Member Information |
| GCAGGACTCCCTTTGGCTGAGCTATTCCAAGACTTTCAAACAATTCAGGATGTTTAATTGGAAGTTCAATGACCTCTTTGAT TTCTTTAATCTGCTGATCCAGACCACCAATCATATCATATGTAGAATCTGGAACCTTTTCCACTTTCATCAGATTGACGAGA GGATCTACTTTGCTTGGCAGCACTAAATGAAGAACATAGCTGTCATTGCGTAGAGCCACTCTTGTAGATGGTGTGATCTTTG TGATATCAATGTTCTTATCAATATCAACCACATACTTCCCTTCCGGATGAACCTTAACCAAAACCTTGTTCTTTCCCATGAC GTTGACAACCTCACCGACATAGGACCCAGGCTCCTGAAGAAGTTGTAGTTCTTCCCTGAGCATTCTCACTCTGGAATTGAGC TCGTTCCGCTGAGCCTCGAGTCGATTGAGATTGTGGGTCTTCTGGCGGACCTGGAGCTGGAGCTCGTGAATGTGTTGGAGAT AGTAAGGGCGGAGCCCCTCGCCGAGTTTGGAGGCGGCGAGCTTGGCGGAGCAGGTGTCCTCCGGCAAGGCCTCGACGGGCTT GGTCTCGACGCCGACGGCAGCCATCGCGATCAAGCAAAAGCCCTAGTCTTGTTGTTGTTGTTGTTATTCGAATCGAAATCGA AAGATGTGAGATTTGAGATTTGGGGGTTTCTCAGAGTTTGATGTCGTTTGGGTTCAACT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 4 | 0 | 0 | 1 | 5 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| NP_568389 | RPT6A; ATPase [Arabidopsis thaliana] | 896 | 9e-095 |
| NP_197500 | (REGULATORY PARTICLE TRIPLE-A 6A); ATPase [Arabidopsis thaliana] | 869 | 1e-091 |
| AAF22526 | 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana] | 866 | 3e-091 |
| CAO44148 | unnamed protein product [Vitis vinifera] | 866 | 3e-091 |
| ABW81135 | unknown [Capsella rubella] | 865 | 3e-091 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| P62194 | 26S protease regulatory subunit 8 | 596 | 4e-061 |
| P62195 | 26S protease regulatory subunit 8 | 596 | 4e-061 |
| P62196 | 26S protease regulatory subunit 8 | 596 | 4e-061 |
| P62197 | 26S protease regulatory subunit 8 | 596 | 4e-061 |
| P62198 | 26S protease regulatory subunit 8 | 596 | 4e-061 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q9C5U3 | At5g19990 | 787 | 4e-082 |
| B9STQ0 | 26S protease regulatory subunit, putative | 766 | 1e-079 |
| Q94BQ2 | Putative 26S proteasome AAA-ATPase subunit RPT6a | 762 | 3e-079 |
| B2BXU8 | Putative uncharacterized protein | 759 | 6e-079 |
| Q9SEI1 | 26S proteasome AAA-ATPase subunit RPT6a | 757 | 1e-078 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT5G19990.1 | RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase | 787 | 3e-084 |
| AT5G20000.1 | 26S proteasome AAA-ATPase subunit, putative | 762 | 3e-081 |
| AT1G53780.1 | ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl cis-trans isomerase | 222 | 1e-018 |
| AT1G45000.1 | 26S proteasome regulatory complex subunit p42D, putative | 218 | 3e-018 |
| AT1G45000.2 | 26S proteasome regulatory complex subunit p42D, putative | 218 | 3e-018 |
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