RU02848 sequence (2020 bp)


Member Information
CTCCACAGACTAAGTAGTGCTTTGAGAGAGAGAGAGAGAAGAGAAGAGGAGAGCTCAACTTTGAAGTTCAAAGCTTTCTTCT
ATGGCTTCTTGGGTGCTTTTACCGGTTGCTCCGGTAACCAGTCGATGCCTGGTGGCTCCGGTGAGGTCCCAGAGGTCCTCCT
CCATCTGTGTTCGATCGTCTCTCGACACAAATGTGTCTGACATGAGTGTAAAAGCTCCAAAAGGGTTGTTTCCACCTGAACC
TGAACACTATCGAGGGCCGAAGCTGAAAGTGGCTATTATTGGAGCTGGACTTGCAGGCATGTCAACAGCTGTTGAGCTTTTG
GATCAAGGCCACGAGGTGGATATCTACGAGTCAAGGCCTTTCATTGGTGGAAAAGTAGGCTCTTTTGTTGATAAACGTGGAA
ATCACATTGAAATGGGACTCCACGTATTCTTTGGTTGTTACAGTAACCTTTTCCGATTAATGAAAAAGGTGGGTGCAGAAGA
AAATCTACTTGTGAAGGATCATACTCACACTTTTGTAAATAGAGGGGGTCAAATTGGTGAACTTGATTTTCGATTTCCAATT
GGAGCCCCCATACATGGGATTCTTGCGTTTTTATCTACAAATCAGATCAAGACTTATGATAAAGCAAGAAATGCATTGGCTC
TTGCATTGAGTCCTGTCGTCAGGGCTCTGGTTGATCCAGATGGAGCATTGAGTGATGTGCGGAATTTGGATAGCATAAGCTT
CTCAGATTGGTTCATGTCCAAAGGTGGCACACGCACGAGTATCCAGAGAATGTGGGATCCTGTTGCATACGCTCTTGGGTTC
ATTGACTGTGACAACATCAGCGCTCGTTGTATGCTCACTATATTCACGTTGTTTGCCACTAAGACCGAGGCATCCCTGCTTC
GCATGCTCAAGGGTTCTCCTGATGTTTACTTGAGTGGACCCATCAGACAGTATATCATTGACAAGGGGGGAAGGTTTCATCT
TAGGTGGGGATGTAGAGAGATATTGTATGATAAATCTGCTGATGGGGAAACTTATGTCGCAGGCCTTGCAATGTCTAAGGCT
ACTAATAAGCAAACTGTGAAAGCAGATGCCTATGTTGCAGCATGCGATGTGCCTGGAATCAAGAGATTGCTTCCGTCCCAGT
GGAGGGAATGGGATTTTTTCAATAATATCTATGAACTAGTTGGAGTTCCTGTTGTCACTGTACAACTTAGATACGATGGCTG
GGTCACAGAGATGCAGGATCTTGAACGGTCAAGGCAATTGAAGCAAGCTTTGGGATTGGATAATCTTCTCTATACTCCGGAT
GCCGATTTTTCATGCTTTGCTGATCTAGCACTTGCTTCTCCAGAAGACTACTACATTGAAGGACAAGGTTCACTCCTGCAAT
GTGTGTTGACACCAGGTGATCCTTACATGCCTCTACCAAACGAAGAAATTATAGCAAAAGTCACGAAACAGGTTTTGGCTTT
ATTCCCATCATCGCAAGGCTTAGAAGTCACTTGGTCATCAGTTGTCAAAATTGGGCAATCTCTATATCGTGAAGGACCTGGT
AAAGATCCATTTAGACCAGATCAGAAGACACCAGTGAAAAATTTCTTCCTTGCGGGATCATACACAAAACAAGACTATATAG
ATAGCATGGAAGGGGCAACTTTATCTGGCAGACAAGCTTCTGCCTATATATGCAATGCTGGGGAAGAGTTGGTAGAATTGCG
AAAGAAACTTGCATCCCAAGAGGGGAATACAAAAGCTGCTAATACTACTGATGAGCTGAGTCTTGTCTAATACAAAATTTTC
ATTCATTTGCTAAGCACAGAGCCAACCGTCACAACCTCAAAAATGTGGAGTCAGCTGGTGACTTAAAGACAGTGCACTTTAT
CAGTTGCCATTGCAAATGCTTTTACATTTATATGTATAGAAAGATAATAGTTAATGTAATGCATAGTTTTTATTCTTAATGA
TGAGGGCATGGCTTCTTTTTACCATTGAAAGCCACAGGAGATTACCATACCC


RU02848 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
41223167

Probe ID Probe Sequeces
yueji_09719AGAAAGCTTTGAACTTCAAAGTTGAGCTCTCCTCTTCTCTTCTCTCTCTCTCTCTCAAAG bl2seq


RU02848 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAQ04225 zeta-carotene desaturase ZDS2 [Malus x domestica] 2751 3e-309
BAB68552 zeta-carotene desaturase [Citrus unshiu] 2562 3e-287
ABC33728 zeta-carotene desaturase [Citrus unshiu] 2549 9e-286
CAC85667 zeta-carotene desaturase [Citrus sinensis] 2547 1e-285
ACE79169 zeta carotene desaturase [Citrus maxima] 2547 1e-285

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9FV46 Zeta-carotene desaturase, chloroplastic/chromoplastic 2504 1e-281
Q9SMJ3 Zeta-carotene desaturase, chloroplastic/chromoplastic 2483 3e-279
O49901 Zeta-carotene desaturase, chloroplastic/chromoplastic 2474 3e-278
Q9SE20 Zeta-carotene desaturase, chloroplastic/chromoplastic 2461 1e-276
Q38893 Zeta-carotene desaturase, chloroplastic/chromoplastic 2386 5e-268

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q5W5X6 Zeta-carotene desaturase ZDS2 2704 9e-304
Q5W5X7 Zeta-carotene desaturase ZDS1 2656 3e-298
A7Q5X2 Chromosome chr14 scaffold_54, whole genome shotgun sequence 2542 5e-285
Q948K1 Zeta-carotene desaturase 2536 3e-284
Q2PPX8 Zeta-carotene desaturase 2522 1e-282

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G04870.1 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase 2386 5e-269
AT3G04870.2 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase 2386 5e-269
AT4G14210.1 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase 617 7e-064
AT4G14210.2 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase 610 4e-063