RU03032 sequence (496 bp)


Member Information
GGGGCGCTTCTGCCACACTCCAATGTGAGAATTGTCGTTGTCGAGTCTCAGACAAGTGAGGGAAGGAGATGGGTCTTTGCAA
CACTTCTTGAGCTTGGAGCTGAGCAGCTCTGCAAGTTCTTTGGGATCCCATGGAAGCTGATGACCATGAGGAAGATGATCAG
TAGGTTTAGTTTCTTGATCATCAGATGGTGGGTTGTTATTGGGAAAATTGGTCTTGGCATTCTGACCGTTCATCAATATGGA
TGCTTGGTCATATGCTCTTGCTGCTGCCTCAGCTGTCTCAAATGTGCCTAGCCACACCCTCCTCTTAAGTAATGGGTGGCGA
ATCTCTGACACCCAAGAGCCCCACTGGCGTTGCCTGACTCCTCTGAACTTCCTTGACTGTACCATGTTTGGTTGCGCTAATT
ATAGTTTCAGAGATACAGTTGCAGAGAAATAATCTGCATTCTAAGTAGTGTGTAGGAGAGATATTAGAAAAAAGAGTAACTC
GTGC


RU03032 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10023

Probe ID Probe Sequeces
yueji_06028ACTAAACCTACTGATCATCTTCCTCATGGTCATCAGCTTCCATGGGATCCCAAAGAACTT bl2seq


RU03032 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABK95171 unknown [Populus trichocarpa] 506 6e-050
NP_196680 SHN3 (SHINE3); DNA binding / transcription factor [Arabidopsis thaliana] 475 2e-046
ABB55257 AP2 transcription factor [Brassica carinata] 466 3e-045
ABB55256 AP2 transcription factor [Brassica juncea] 455 5e-044
NP_172988 SHN1/WIN1 (SHINE1); DNA binding / transcription factor [Arabidopsis thaliana] 454 6e-044

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9LFN7 Ethylene-responsive transcription factor SHINE 2 408 1e-039
Q9XI33 Ethylene-responsive transcription factor WIN1 387 4e-037
Q3E958 Ethylene-responsive transcription factor SHINE 3 308 5e-028
Q94AW5 Ethylene-responsive transcription factor ERF003 256 5e-022
P16146 Protein PPLZ02 233 3e-019

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9HA50 AP2/ERF domain-containing transcription factor 425 1e-040
A9PFL8 AP2/ERF domain-containing transcription factor 424 2e-040
A1X3G9 AP2 transcription factor 399 1e-037
B9IMZ4 AP2/ERF domain-containing transcription factor 399 1e-037
B9RV55 DNA binding protein, putative 395 4e-037

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor 408 2e-040
AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor 387 4e-038
AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor 308 6e-029
AT5G25190.1 ethylene-responsive element-binding protein, putative 256 6e-023
AT1G43160.1 RAP2.6 (related to AP2 6); DNA binding / transcription factor 219 1e-018