RU03648 sequence (1567 bp)


Member Information
TAGGGAGGTTGCTAGTAAGACCAATGATTCTGCTGGTGACGGCACAACAACAGCATCCATTCTTGCACGGGAGATAATCAAG
CTTGGGCTCTTGAGTGTCACCTCTGGTGCAAATCCCGTTTCAATTAAGAAGGGGATTGATAAAACTGTACAGGCATTGGTGG
ACGAACTAGAGAACAAGTCTAGGCCTGTTAAGGGTCGTGATGATGTTAAAGCTGTTGCATCTATTTCTGCTGGGAATGATGA
GCAAATTGGAACAATGATTGCTGATGCTATCGACAAGGTTGGACCTGATGGTGTTTTGTCCATTGAGTCTTCATCCTCATTT
GAGACGACCGTCGAAGTGGAAGAAGGAATGGAGATTGACAGAGGATATATCTCCCCTCAATTTGTTACAAACCCGGAGAAAT
TGATTGTTGAGTTTGAGAATGCAAGAGTCTTGATTACAGACCAGAAGATTTCAGCTATCAAGGACATAATTCCCCTGTTAGA
AAAGACCACTCAGTTGAGAAGCCCTCTGCTTATTATTGCTGAGGATGTCTCTGGGGAGGCTTTGGCGACTCTTGTTGTCAAC
AAGTTGAGGGGTATACTGAATGTTGCTGCCATCAAAGCCCCAGGTTTTGGTGAGCGCAGAAAGGCTCTCCTCCAAGATATTG
CCATTTTGACTGGTGCCGAGTTTCAAGCCAATGATCTTGGTCTACTGATTGAGAACACCACAGTTGAGCAGCTTGGTTTGGC
CAGAAAGGTGACAATCTCGAAGGACTCCACTACCATCATTGCTGATCAAGCTTCAAAGGATGAGTTGCAATCTAGAATTGCA
CAATTGAAAAAGGAGTTGTCTGAAACAGATTCTGTATATGACACTGAGAAATTGGCTGAGAGGATTGCCAAACTATCTGGGG
GAGTTGCTGTTATAAAGGTTGGTGCTGCTACTGAAACCGAACTTGAGGACCGTAAGCTCCGTATTGAGGATGCCAAGAATGC
CACTTTTGCTGCCATAGAGGAAGGGATTGTTCCTGGTGGCGGTGCTGCATTGGTACATCTTTCAACATATGTCCCTGCAATC
AAGGACAGACTTGAAGATGCAGATGAGAAGCTCGGTGCTGATATTGTGCAGAAGGCTCTGGTAGCACCAGCAGCATTGATAG
CTCAAAATGCTGGAATTGAAGGTGAAGTGGTGGTGGAGAAACTAAAAGAGAGTGAATGGGAGGTCGGCTACAACNCAATGAC
ACACNCCTAAGAGAACCTAGTGGATGCTGGTGTTATCGACCCAGCAAAGGTTACAAGATGTGCTCTGCAGAATGCTGCCTCA
GTTGCAGGAATGGTCTTGACCACTCAGGCTATTGTGGTGGAGAAGGCTAAGCCCAAGTCACCTGCTGCTGCTGCTGCACAAG
GACTCACTGTGTAATTTGTAGTCTGTTTAGGTAGCCAGAATTTTGATAGAGAGGTCTATTCAGTGCATTTCGGTTAAAGTTG
CTCGGTGAAACTTTCTGTACGGATTTGACAGGATTGATTGTTTCTACATAAAATTGAGCTGCAAGTATTGTAATATCAGGTG
TTTTTGGAG


RU03648 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
1382124

Probe ID Probe Sequeces
yueji_00973CTTTCTGTACGGATTTGACAGGATTGATTGTTTCTACATAAAATTGAGCTGCAAGTATTG bl2seq


RU03648 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
P08926 RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic; AltName: Full=60 kDa chaperonin subunit alpha; AltName: Full=CPN-60 alpha; Flags: Precursor 2072 1e-230
CAO16795 unnamed protein product [Vitis vinifera] 2060 3e-229
BAE71311 putative rubisco subunit binding-protein alpha subunit [Trifolium pratense] 2051 4e-228
BAE71231 putative rubisco subunit binding-protein alpha subunit [Trifolium pratense] 2044 2e-227
BAE71227 putative rubisco subunit binding-protein alpha subunit [Trifolium pratense] 2044 2e-227

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P08926 RuBisCO large subunit-binding protein subunit alpha, chloroplastic 1950 1e-217
P21239 RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) 1906 2e-212
P21238 RuBisCO large subunit-binding protein subunit alpha, chloroplastic 1867 6e-208
P08824 RuBisCO large subunit-binding protein subunit alpha (Fragment) 1846 2e-205
P08823 RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) 1821 1e-202

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9HQD5 Predicted protein 1966 2e-218
B9MZ75 Predicted protein 1955 5e-217
A7PQU6 Chromosome chr6 scaffold_25, whole genome shotgun sequence 1929 5e-214
Q2PEP1 Putative rubisco subunit binding-protein alpha subunit 1926 1e-213
Q2PEW7 Putative rubisco subunit binding-protein alpha subunit 1919 7e-213

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G28000.1 CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding 1868 4e-209
AT5G18820.1 EMB3007 (embryo defective 3007); ATP binding / protein binding 1362 2e-150
AT1G55490.1 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding 1103 2e-120
AT1G55490.2 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding 1103 2e-120
AT3G13470.1 chaperonin, putative 1098 8e-120