RU04167 sequence (596 bp)


Member Information
TCTACACTACTTCGCTCTCTCTCTCTCTTCGGCACAATGGCTCGAGGCTCATCTCAGTCCCAAGCGACGTCGTCTTCCACGA
CCTCACGTCCCGGCGTCATGGCTCCTCGCGGTTCAGCTGCCGCCACAGCTGGAATGCGCCGCCGTCGTCTCGGCGGAGGCGG
CAACTCCAGCTCCGGAAGCATGGGCGGCGGCGGAGGCGGCTCTGGTGCCGGAAACAACATGCTCAGGTTCTACACCGACGAC
GCTCCTGGCTTGAAGATCTCCCCCACCGTCGTTCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGCCCTCCACGTCT
TCGGCAAGCTCTACCTCCACCGATCTACCGGCGGAGCTTAGATTCCGGATCCTAACACGGATCGTTCTAGATCCGGAGCTAT
TTGGAGGCGCGGAGCAATCGGTAATTTCAATGCTACGGTCTTTTTTTATTTTTTTTGCTTTTGCTCTGTAGATTTGCGCAGG
GTTGACGTTTTTAGGGTTTCACTGCTGTTTAATGTTGGATTCGTTTGGTCTTACTTTGAATGAATGAAGACGAGTGACTTGA
TACACCCTTATGAATTTAAAAA


RU04167 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
660214

Probe ID Probe Sequeces


RU04167 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_200854 sec61beta family protein [Arabidopsis thaliana] 414 5e-039
CAN75561 hypothetical protein [Vitis vinifera] 388 5e-036
CAO21820 unnamed protein product [Vitis vinifera] 384 1e-035
ABK25751 unknown [Picea sitchensis] 376 1e-034
ABG24204 putative transport protein [Gymnadenia conopsea] 363 4e-033

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P38389 Protein transport protein Sec61 subunit beta 152 9e-010

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q9FKK1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 210 2e-015
A5AE58 Chromosome chr13 scaffold_17, whole genome shotgun sequence 208 3e-015
A7NZG9 Chromosome chr6 scaffold_3, whole genome shotgun sequence 201 2e-014
Q156E3 Putative transport protein 200 3e-014
Q2HSW3 Sec61beta 200 3e-014

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G60460.1 sec61beta family protein 211 1e-017
AT3G60540.1 sec61beta family protein 155 5e-011
AT3G60540.2 sec61beta family protein 155 5e-011
AT2G45070.1 SEC61 BETA; protein transporter 152 1e-010
AT2G45070.2 SEC61 BETA; protein transporter 152 1e-010