RU04434 sequence (275 bp)


Member Information
ACCTTGCAATAACATCCTTTGTGCTGGAGCTGGAGGACTCGAAGAGCTTTCCAGTAGCAGAGAAGATGATGACAGCATACTC
ACAATCACAGAGAACCGACAGCTCTCCAGCTTTCTTCAAAAGCCCTCTTCTCCTCTTCGAAAACGTCACCTGCCTCGCCGGC
AAGTTGTCGATCTTCCTGATCTTTATCTTCTCCCTCGTCGGCTTCGACATAGCTTAGCTAGCCAGCAGTTTGCACATATATG
CTCAGCTAGCTCATGAAATACATCAAGCG


RU04434 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01102

Probe ID Probe Sequeces
yueji_11312TGAAGAAAGCTGGAGAGCTTTCGGTTCTCTGTGATTGTGAGTATGCTGTCATCATCTTCT bl2seq


RU04434 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABJ96361 dam1 [Prunus persica] 273 4e-023
ABJ96368 dam1 [Prunus persica] 267 2e-022
ABJ96358 dam4 [Prunus persica] 262 8e-022
ABJ96362 dam2 alpha [Prunus persica] 262 8e-022
ABJ96369 dam2 alpha [Prunus persica] 262 8e-022

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9FVC1 MADS-box protein SVP 240 2e-020
Q9FUY6 MADS-box protein JOINTLESS 235 7e-020
Q5K4R0 MADS-box transcription factor 47 226 8e-019
Q39295 Agamous-like MADS-box protein AGL15 211 4e-017
Q38847 Agamous-like MADS-box protein AGL15 210 6e-017

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A6XMZ8 Dam1 273 4e-023
B9H6V0 Predicted protein 269 1e-022
A6XN09 Dam1 267 2e-022
B9GN39 MADS9, AGL24 mads-box transcription factor 266 3e-022
A6XMZ5 Dam4 262 8e-022

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G24540.1 AGL24 (AGAMOUS-LIKE 24); protein binding / protein heterodimerization/ protein homodimerization/ sequence-specific DNA binding / transcription factor 244 6e-022
AT2G22540.1 SVP (SHORT VEGETATIVE PHASE); transcription factor/ translation repressor, nucleic acid binding 240 2e-021
AT2G22540.2 SVP (SHORT VEGETATIVE PHASE); transcription factor/ translation repressor, nucleic acid binding 212 3e-018
AT5G13790.1 AGL15 (AGAMOUS-LIKE 15); DNA binding / transcription factor 210 5e-018
AT3G57230.1 AGL16 (AGAMOUS-LIKE 16); transcription factor 209 6e-018