RU04620 sequence (1599 bp)


Member Information
GGAGCCTCTCTCTCTCTCTCTTCTCAGCTTTGCTCTGCTCTCATTCACTTTTGTTTTGCTAAAAATTTTCTTTGACGAATTC
CGGAAGGCGTTTCTGGGTCTTGTTCCTCTTTGTCTGATCCAAACGGGTTCTTCAGTTGATAATTTTGTAGTCTGATGTCTCC
ACCACTGCTGGGTGGTGAGGGGGAAGGGAAGAGCAATGGATCGATGGTAGCTTGTTCTCCCTCTATGGACATGATCCCTCAG
AACAGCTCAGGACTGAAAGAGCGTAACTACCTTGGGTTGTCAGATTGTTCTTCAGTTGACAGCTCCACTGTCTCAAGCTTGT
CAGAGGAGAATAAGAGCAAGTTCAATTTTAAGGCTACAGAGTTGAGGCTTGGTCTTCCTGGATCCCAATCACCAGAACGACA
ATCAGAGCTTTGCTTGCTTGATGAGAAGCCACTGTTTCCTTTGCTTCCTTCAAAAGATGGAATATGTTCCTCATCCCAGAAA
AATGTTGTTTCAGGCAACAAAAGAGGCTTTTCTGATACCATGGACGGATTCTCAGAGGTGAAAAGTTCTGTATATAATGAAG
GAAATTGGATGTTTCCTGCAGCTGGTTCTGATTCTGAATCACCAGAGTCTGTCGGACAAGGTAAGTTTCCTGTGAGTTCAAT
CAATGTGATGCTCTCATCCAGGACTTCTGGGACTCAGCCAACCAAGATGAAAGATATTATGACCAAATCTTCAAAAGATCAG
TCCAATGCTACAAATGGAGCTGGCCAGAACCATGCGGCTGCTTCTAACAACAACAGTGCCCCCGCTGCTAAGGCACAAGTTG
TAGGGTGGCCTCCAATAAGATCTTTTAGGAAGAATTTAACCACCGCTTCAAAGAACAATGATGAAGTTGATGGAAAACCTGG
TCGAGGTGCTCTTTTTGTCAAGGTCAGCATGGATGGTGCTCCCTACCTGAGGAAGGTAGATCTGAGAACCTACTCAACATAT
CAAGAGTTGTCTTCTGCTCTGGAAAAGATGTTCAGCTGTTTTACCATCGGGCAATATGGATCCCATGGAGCTCCAGGGAGGG
AAAGATTGAGTGAGAGTAAGCTGAGAGACCTTCTTCATGGATCAGAATATGTGCTTACATATGAGGACAAGGATGGTGATTG
GATGCTTGTCGGAGATGTCCCATGGGAGATGTTTATTGATTCATGCAAGAGGTTGAAGATAATGAAGGGCTCTGATGCCATT
GGCTTAGCTCCTAGGTCCATGGAGAAATCCAAGAACCGGACCTAGCCAAGTCCCCAAAAATGACTGTTTCGAGTTGCCTTAT
TCAAAGTGAAGATCAGAGTTTTGGGGAAAGAGTGAGCTAGCCACAAAAGTTGTAACTTGGAGGAAGAACACTGACAGGATGG
ATGTCGGGGGCTGGATGGCAGTATCATCTTGTCTTTGATGTTTTCATTGTCATCAGTCTGTTTTGAGTCTTGTTTGTTATGA
AACCTATTAAGACTGGTTAAAATTATTAATGTTTGTGAAGTCCATATAGCCTACTAGTTATTGAAGCTGTTGAATCTGATGA
TTATGTTTTATCACTGTCGTTGATTGCCCTTAAAAAAAAAA


RU04620 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
13290143

Probe ID Probe Sequeces
yueji_04733CTAGTTATTGAAGCTGTTGAATCTGATGATTATGTTTTATCACTGTCGTTGATTGCCCTT bl2seq


RU04620 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO41800 unnamed protein product [Vitis vinifera] 799 5e-083
AAM12952 auxin-regulated protein [Zinnia elegans] 786 2e-081
CAC84706 aux/IAA protein [Populus tremula x Populus tremuloides] 778 1e-080
AAL92850 Aux/IAA protein [Vitis vinifera] 778 1e-080
CAO61556 unnamed protein product [Vitis vinifera] 778 1e-080

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q38826 Auxin-responsive protein IAA8 654 3e-067
Q38827 Auxin-responsive protein IAA9 624 8e-064
P0C132 Auxin-responsive protein IAA30 554 1e-055
Q5Z749 Auxin-responsive protein IAA21 535 2e-053
Q38832 Auxin-responsive protein IAA14 505 5e-050

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9SSC6 Transcription factor, putative 1015 5e-108
A9PFN4 Predicted protein 1008 3e-107
O22465 GH1 protein (Fragment) 776 2e-080
A9YWR0 GH1 protein 749 3e-077
B7FIH2 Putative uncharacterized protein 738 6e-076

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G22670.1 IAA8; transcription factor 654 3e-068
AT2G22670.3 IAA8; transcription factor 654 3e-068
AT5G65670.2 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor 638 2e-066
AT2G22670.2 IAA8; transcription factor 632 9e-066
AT5G65670.1 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor 625 6e-065