RU04685 sequence (925 bp)


Member Information
CATATATATTCACATCCCCTGCGCTCCATCTTCTCCACCATCTCCAACACACTTGCATACTTTCCTTACATTCCAATCCAAA
CTCTCAAAGCCCTCAATACACAAATTCTAAAATGGCTGAGAGATCCAACTTTGCGCAGACCTGCAACCTCCTCAGCCAGTAC
TTGAAGGAGAAGAGAAGCCAGTACCTGCAGGGAGATAGCTTCGGAGTGAAGCCAGCCCCGGCGACCATGAACTTGCTCAACA
CCATGGAGGCCGGCCCTCCAGCGGCGGCGAGTACTCCAGTGGGCCAGGCTCCGGATCAGCCCAGATCTGCTCCCATGACCAT
CTTCTTCGGCGGGCAGGTCCTGGTTTTCAACGACGTTTCGGCTGAGAAGGCAAAGGAAATTATGGGATTGGCTACCAAAGGA
AGCGCTGTGGTTTCCTCTACTGAATCGAATGTTGTAGTCAAACAACAACAACCACCACCACCTCAGGCTGTTAGGTCGGATT
TGCCTATTGCAAGAAGGGCTTCGCTTCACAAGTTTCTGGCCAAGAGGAAAGAGAGAGTGACTGCAGTAGCTCCATACCAACT
GAACCACATCCAGAGAGCAGCTTCTCCCAAGGCAGAGGAACGAGTCGGAGCGCAAAGTTCAAAGCAGCTTGAACTCAGTCTA
TAGGGAAGATTTAACTAGCGCTCGATCTGATTAGATTTTAGGCTTTATATTATGGGTTTTTTAGCGGAGGAGGCTCGTGTTC
CCGACTCTGTTGTAGAACCCAATTTATTCTCACAACAAAATTTAATTTTTGTAAGTATTTGTTTGATCAATCGATATAGATT
GATCCATTTATGAAGATTATGATAATACTATCCGGTGTGTAATTGAATTTCTTTCATAAAGCAAGTTTTTTAATTAGGAATT
CGTAACTTGTCTGGGATTGGATG


RU04685 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
8110221

Probe ID Probe Sequeces


RU04685 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_001130163 hypothetical protein LOC100191257 [Zea mays] 173 1e-010
ABK96213 unknown [Populus trichocarpa x Populus deltoides] 153 2e-008
CAO65210 unnamed protein product [Vitis vinifera] 137 1e-006
NP_565096 JAZ2/TIFY10B (JASMONATE-ZIM-DOMAIN PROTEIN 2) [Arabidopsis thaliana] 134 3e-006

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q93ZM9 Protein TIFY 9 141 4e-008
Q9S7M2 Protein TIFY 10B 134 2e-007
Q9LMA8 Protein TIFY 10A 133 3e-007
Q9M246 Protein TIFY 3A 129 9e-007

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B3Y563 Jasmonate ZIM-domain protein 3 308 2e-026
B9GVY7 Predicted protein 248 2e-019
C0PFI1 Putative uncharacterized protein 177 3e-011
A7P6F8 Chromosome chr9 scaffold_7, whole genome shotgun sequence 146 1e-007
A5C160 Putative uncharacterized protein 145 2e-007

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G13220.1 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10) 141 4e-009
AT1G74950.1 TIFY10B 134 2e-008
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding 133 3e-008
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding 133 3e-008
AT3G43440.1 JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11) 129 9e-008