RU04798 sequence (1057 bp)


Member Information
AATACATCTTCCCACTGATCCACGCTTTTGAACCTTTGTATACGTTCTCAAACGTTGGGCCTGTGATCCCCACAAACCATTA
TTTAGAACTCCAGCATCATTTAGAGCAACATCACTAGAGCACCCAGGCTTGAATGGCATGTTTGGCGCCCCAAATGATTGAG
AGCTGATTGCAGCAGTAGATAGCTCTGTCTCAATATCTCTTGGTGTCCCACCATAATTAGACAGTAAGTTCTAAAGATCTTT
CTGAGAGTCATATCCTCTTGACATCAAAGTGTCAGGTGCCAATCCATCAACATTAGCTGAAAACGGAAGATTGTTCCGAGGA
TGTGATTGGACATCACCATCTAAACAGAAGGATGGGAGTGCGTAGTTCTGCTGTATTGTGCTAGCATCCAGACAGTATGAAG
TTCCAGAAGAGGAAGCTTCCAACTGATCAGTGATGGTACCTTTATATTTAATTTGGTCCAGTCCTTTTGAAATGGGCAACTC
ATGTTTGATTCGAATATCAGACTTGCTCTGAAAATCATGAACCAAGTTACTAGAAGGCTCCGCCACTGGATCCCCTATCAAC
ATGGCTGTTCCTTGCTGATTCCTGTTCAGTAGGTTTGATGAGGACACCTGGCAATTATTTGTAGAAGGGGAGGTTGAACATG
ATGGACCGTCCCCCTCTGTAAGATTGGAATGGCTTCTGATTGCTGTAACTGGCTTGTGCTGGTTCTGTTGTTGGATAGATGA
AACATGTTGGGCCTGCATCATTGGTGAAGCCGAGAAGTTGTTGCTGCTGAGAAGTTTGTCTGCTGAGAAGCTGTTACCGCTT
AGCTGTTGCTGATGATGCTGAGACAGAGGCAACTGCAACTGTTGTAATTGCTGGTTTTGTTGATGGGCCAGCTGCTGCTGTA
GCATTTGCGGCTGCAAAAGTGGGCTTGATGGAGAGAATAATTGTTGTTGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTG
TTGCTGCTGCTGTTTCTGAAGCAAGTGTAAGTGAAGTTGTTGCTCAGACAAAGCCTGTTGTGACGATGATTGT


RU04798 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
41106

Probe ID Probe Sequeces
yueji_02458TTGTTGGATAGATGAAACATGTTGGGCCTGCATCATTGGTGAAGCCGAGAAGTTGTTGCT bl2seq


RU04798 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
BAD19061 auxin response factor 1 [Cucumis sativus] 1138 2e-122
CAN69277 hypothetical protein [Vitis vinifera] 1101 3e-118
CAO65203 unnamed protein product [Vitis vinifera] 1101 3e-118
ABO33637 auxin response factor [Solanum lycopersicum] 789 4e-082
NP_001057054 Os06g0196700 [Oryza sativa (japonica cultivar-group)] 518 1e-050

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P93022 Auxin response factor 7 654 2e-067
Q8RYC8 Auxin response factor 19 602 2e-061
A2YAA5 Auxin response factor 16 518 9e-052
A3B9A0 Auxin response factor 16 518 9e-052
Q6YZW0 Auxin response factor 21 157 7e-010

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A5APM9 Putative uncharacterized protein 1036 1e-110
A7PDS6 Chromosome chr11 scaffold_13, whole genome shotgun sequence 1036 1e-110
B9RR61 Auxin response factor, putative 1007 2e-107
Q6L8U3 Auxin response factor 1 988 4e-105
B9MT22 Predicted protein 976 9e-104

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G20730.1 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator 654 2e-068
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator 654 2e-068
AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator 654 2e-068
AT1G19220.1 ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor 602 2e-062