RU05130 sequence (573 bp)


Member Information
AACTAACAAAACACAACATCTCCAAAATCCCTAGAAAACAGTCCCCACTACTCTTCTCCTCCCCATTCCCATTCCCATTCCC
ATTATCCCAAACCCAAAATCTCTCTCTCTCTCTTCTTCTTCTTCTTGTTCCTCAGATCTCTAGGTCAATTCAATCCCCATTT
GCAATCTCAGCTCAAGAAATACATACAAGGTTTTGATTTCTTTTGTGTGTAGGGTTTAAAAGACCAAAAAATAAAAAAGTGG
GCATTTGAGGAGTCAGATGTCTGATGTGAGATGAAGAAGAAGACCACTCTCTTTGATTTTTCTCTTCTTCTCCTCACTACTG
CTTTCTTCTTTGCTTCTACACTCTCATCATCCAGCCACATTATCAGCCATGGAAGTCTCACCGACGCCGAGGCCCTCTACAT
CAAGCAGCGGCAGCTGCTCTACTACCGGGACGAGTCCGGCGACCGGGGAGAGATCGTGAAAGTAGACCCTTCTCTGGTTTTC
GAAAACAAGAGACTCCGAAATGCTTACATAGCATTGCAAGCTTGGAAGGAGGCTATTCTCTCCGACCCTTTCAATCTCACC


RU05130 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
550010

Probe ID Probe Sequeces


RU05130 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO65553 unnamed protein product [Vitis vinifera] 310 5e-027
NP_189091 leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] 286 3e-024
NP_193602 leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] 278 2e-023
NP_193070 leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] 193 2e-013
ACG28001 unknown [Zea mays] 180 6e-012

Swiss-Prot top hits
Accession No. Description Score e value
no blast result!

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7PES6 Chromosome chr11 scaffold_13, whole genome shotgun sequence 289 1e-024
B9ILJ5 Predicted protein 274 7e-023
Q9LHF1 Extensin-like protein 251 3e-020
Q9SN46 Extensin-like protein 248 7e-020
B9N8Z7 Predicted protein (Fragment) 233 4e-018

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G24480.1 leucine-rich repeat family protein / extensin family protein 251 3e-022
AT4G18670.1 protein binding / structural constituent of cell wall 248 7e-022
AT4G13340.1 leucine-rich repeat family protein / extensin family protein 179 7e-014
AT4G33970.1 protein binding / structural constituent of cell wall 155 4e-011
AT2G15880.1 leucine-rich repeat family protein / extensin family protein 153 7e-011