Member Information |
| GCACGAGCTCGCACACCCCTCTCTCTCTCTCTCTCTCTCTACTACTCCCACTCTCTACTACTCTCACTCTCCAACCATGTCG ACCGCCGACGCCGAGCACAGAGAAGAAGAGGAGCCCCTCGCCGGAGATGACGAGGACACCGGAGCCCAGGTCGCCCCGATCG TCAGGCTCGAGGAGGTCGCCGTCACCACCGGTGAAGAGAACGAAGATGCTGTCCTCGATCTGAAAGCTAAGCTGTACCGATT TGATAAGGATGGGAATCAGTGGAAAGAGCGAGGTGCTGGCACTGTGAAGCTTCTGAAGCACAAGGAGTCCGGCAAGGTTCGC CTTGTTATGAGGCAGTCTAAAACCCTAAAGATCTGCGCCAATCATCTTGTTCTGCCTAAGATGACGGTTCAGGAGCACGCCG GGAATGAGAAGTCTTGTGTGTGGCACGCTACTGACTTTGCTGATGGTGAATTGAAGGAAGAGCTTTTCTGCATTAGATTCGC TTCGATTGAGAATAACAGGTTGTTCATGGAAAAGTTCCAGGAAGTTGCTGAGTCCCAAGAGCCTGAAGAAGAAAATGAAGAT GCTAGTGCAGCTGCTGGGCTTCTCGAGAATTTGAAGGTTGAGGAGAAAGAGACTAAGACCGAAAAGAAAGATGAGGAAGCAG CACCTGCTGAAGTCAAGGAGGAGGAGAAGGACAGTAAGAGTGATAAGGCTGGAGAATCCACTTCCTCAACTTGAATATAGGT GTTTTGTTATATCCATATATATACTTGAGATCCTGATGAGGTTAGTTTGGCTGGCTTCTGTTTTGCGTCAAAGTCTTGGGAT AATTCAAGGTGGTGGTGAAGTTGAGTCATTGTTTATGGGCTCAATGCTGTGTGTCTTTTCAGAGTCTGGTTTGTTGTCAAGA GTCTCTCCCTAGAGTTTTCCCATATTGGGAGTAAGTTGCAGGTCAGCGAAAATTACTTGTTATTTATAAACAGAGGAGCTTT TGTTTGGATATAAATTCTTGATTTGTTCACGGTCTTGATTAGTTTTATGAGCAGTGTGGTTCTATTGCTTATTGCAATGAAT CACATGTTGCATCTGCCAGAACAAAGTTGTCTTTTCTGGCAGAAGCATTTCGGTTGTTATATTGTGTTGAAACTTTCAAGTG GTGAAGGTCCTGGCTTTCTTGATAGAAAGAAAATGTGGCTTT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 13 | 18 | 0 | 2 | 33 |
| Probe ID | Probe Sequeces |
| yueji_05098 | ACCGGTGAAGAGAACGAAGATGCTGTCCTCGATCTAGAAAGCTAAGCTGTACCGTATTTA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| ABK92744 | unknown [Populus trichocarpa] | 819 | 2e-085 |
| CAO21426 | unnamed protein product [Vitis vinifera] | 805 | 7e-084 |
| NP_172194 | SIRANBP (Ran-binding protein 1a); Ran GTPase binding [Arabidopsis thaliana] | 791 | 3e-082 |
| CAA66045 | atranbp1a [Arabidopsis thaliana] | 789 | 5e-082 |
| CAO50115 | unnamed protein product [Vitis vinifera] | 781 | 4e-081 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q9LMK7 | Ran-binding protein 1 homolog a | 651 | 4e-067 |
| P92985 | Ran-binding protein 1 homolog c | 649 | 7e-067 |
| Q8RWG8 | Ran-binding protein 1 homolog b | 638 | 1e-065 |
| Q09717 | Ran-specific GTPase-activating protein 1 | 360 | 2e-033 |
| P49792 | E3 SUMO-protein ligase RanBP2 | 359 | 3e-033 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9HND6 | Predicted protein | 684 | 7e-070 |
| A7NYC5 | Chromosome chr6 scaffold_3, whole genome shotgun sequence | 683 | 1e-069 |
| A9P8P1 | Predicted protein | 680 | 2e-069 |
| B5AJV3 | Ran-binding protein 1 | 677 | 5e-069 |
| A7QHN4 | Chromosome chr8 scaffold_99, whole genome shotgun sequence | 668 | 5e-068 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G07140.1 | SIRANBP; Ran GTPase binding | 651 | 4e-068 |
| AT5G58590.1 | RANBP1 (RAN BINDING PROTEIN 1); protein binding | 649 | 7e-068 |
| AT2G30060.1 | Ran-binding protein 1b (RanBP1b) | 638 | 1e-066 |
| AT1G52380.1 | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein | 122 | 9e-007 |
| AT3G15970.1 | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein | 116 | 4e-006 |
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