Member Information |
| GAGGGTTCCTCTAACTTCTTCAACACTGCTCTCTCTCCAACCAAATCATAGTGATTTGGGGCCTTGTTTTCGCTTCTGGAGC TACATATTCAGCTCCTGCTCGTGTTATCTGTATCTAATTTCTTTGCTAGGTACTAGGGTAAATTTTTGAAATTCGTGCCTTG TCGGTGTTTAATTTTGGTTGCTCGGCCGTTTTTCCTGTGTTGATTTGTAATGCCTGGGTTGGATCTCTGGTTTTGTGGTCTT AGTGTGTAGGCACAGCTTTCTGGGTTTTTGGGATCTGACCATCGAAGCAGGTTTGCAAGATGGAGAGCATCCATACCTATTG GCAGTTGGGTGATGAGCTTCGTGGACAGTCGAAAGTTGCAGAGGATCACAAATGGTTAATGGTTGCTTCCAAATTGGCTGAG CAAACAAGGTCAAAGGGCGAGCGCATGAATAACCTTGATCTTTCAAAGGGCCCAACTGAAACAAGAGCAAGGGACAAATTTG GGTTCCAGGAAGATAACAAATTTGAAAGCCTTAACTTTAACATGTTGAACTTGGACTCGAAAGTAAATGAAAATGTGAGCAA GAGTTCCTTTAGGAATGGGATTTACAACATGAATGCAGTTTACCAGAAAAACAGTGCAAGCTTTGTGGGGAACATGACTGGT AACAAGTACAATGGCAATCACCTCAGCAACAAGGAAACCAACAACAGCGGTAATAACAACAACAACAACAACGAAACTGGGA ATGTTGTTGAGAAAAGGTTCAAGACCTTGCCTGCAACTGAGACACTTCCCCGAAATGAGGTGCTTGGAGGTTACATCTTTGT ATGCAACAATGACACAATGCAGGAAGATTTGAAGCGACAACTATTTGGTTTACCTCCAAGGTACAGGGACTCTGTTCGGGCG ATTACACCTGGCTTACCTCTGTTTCTCTACAACTATACAACCCACCAACTGCATGGCATTTTTGAGGCATCAAGCTTTGGCG GTTCAAACATTGATCCAACTGCTTGGGAAGACAAGAAATGTAAAGGCGAGTCAAGGTTTCCTGCGCAGGTAAGGATCTGTGT TAGAAAAATCTGCAAGGCTCTGGAAGAAGATTCCTTCAGGCCAGTCTTGCATCACTATGATGGTCCAAAGTTCCGTCTTGAG TTGTCAGTTCCTGAGACCCTGGATCTATTGGACCTATGTGAGCAAGCCGGCTCTGCAGCATAAGCTAAATGTTGGCCAGCAA TATGTGGATGTAGCAGGTTCTGTGGTGTATGTCAGCTGTGTGCTTTTTGACAGATTTTCCATGTAGCGCAAGCTTGGGGGTG AAGTCTGGTTTTTATTTTATTTTGTGGAGTTAAGTAGTAGCGTGAGTGAGCCTGCTGAATAAGTGAGTGTCTCTGGAGATGC TTATTTAAGTAGTTGTACAACCTTTGTTAGCTTTTGATGATGATGAAGACAAATAGGCCGGATGTAAAAGAGAATGTCAGCT GTGTAATGTAATGATGCGTCTCTAATTTGTGCCCTATGAACTGGAGTCTGGGATGTAATCTGTCATTGGTTTGGTAAAAATG GGAGAGAATCTACCATATAATTGTGTACTGGATATGATGTCTTTGCGCTCTGATATGGCTTGCGTTTGAGATTTCTATCGAC GAGCATATGTTAAATGCTGTAATTCTGCTTCAAAAA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 25 | 22 | 0 | 1 | 48 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAA04664 | hypothetical protein [Citrus x paradisi] | 1306 | 9e-142 |
| NP_189345 | unknown protein [Arabidopsis thaliana] | 1201 | 1e-129 |
| AAM64572 | gda-1, putative [Arabidopsis thaliana] | 1201 | 1e-129 |
| ABB16967 | unknown [Solanum tuberosum] | 1148 | 2e-123 |
| CAD37200 | GDA2 protein [Pisum sativum] | 983 | 3e-104 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| P37707 | B2 protein | 682 | 2e-070 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9RBI2 | B2 protein, putative | 1261 | 1e-136 |
| B9N102 | Predicted protein | 1254 | 1e-135 |
| B7FJI3 | Putative uncharacterized protein | 1245 | 1e-134 |
| B9GJT9 | Predicted protein | 1216 | 2e-131 |
| O23769 | Putative uncharacterized protein | 1216 | 2e-131 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT3G27090.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). | 1121 | 2e-122 |
| AT5G42050.1 | FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). | 657 | 1e-068 |
| AT5G01660.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11000.2); Has 12390 Blast hits to 5423 proteins in 323 species: Archae - 22; Bacteria - 787; Metazoa - 8729; Fungi - 223; Plants - 966; Viruses - 639; Other Eukaryotes - 1024 (source: NCBI BLink). | 245 | 7e-021 |
| AT3G11000.1 | LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01660.1); Has 173 Blast hits to 164 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 4; Plants - 153; Viruses - 1; Other Eukaryotes - 7 (source: NCBI BLink). | 232 | 2e-019 |
| AT3G11000.2 | EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01660.1). | 232 | 2e-019 |
|
|