Member Information |
| GGTAGAGCGGAGGGCTAGAGAGAGAAGCAGAGAACCCTAATTTTTATTTTTTAGAGAGAGAGAGAGACAGGAAGAAGAAGAA GAGAGACGATGTCAGGAGTTGCGAGCCAGCCCCAGGAGGAGGACAAGAAGCCCAACGATCAGGGTGCTCACATCAACCTCAA AGTGAAAGGCCAGGATGGGAACGAAGTCTTCTTTAGGATCAAAAGAAGCACTCAACTCAAGAAGCTGATGAATGCCTACTGT GATCGCCAATCTGTTGAGCTCAACTCCATTGCCTTCCTGTTTGACGGCCGTCGTCTGCGAGCAGAGCAGACCCCTGATGAGC TTGAAATGGAAGATGGGGATGAGATAGATGCTATGTTGCACCAGACTGGAGGAGCTGCACAGCTTTGAATATATTATGTTAT GAAAGACCGACTTTGTTCTATCAATCTAGGTTTATGAGGCGTTAGGATTTTAGTCTGTATAAGACTTTTGTTCTCTATTTCA AGTTTGCTGGTCGTTCTGTGTCAGTAACTTATTAAAATTGATGTGATGTGGATTTGGAATCATTAGATTCAAGTGGTCTTGG AATTCAGTTTACTGAGCTACAAATTACTGTTGTTCCATGCATTTGTAATCTATGTATTAGCTTTTAGCAGTCTTGGAATTCA TTTTCTGAGCCATAAATGTCTGTTATCCCCAGCATTTTGATCAAATTTTTTGGTTTCTGGATAGTCCAAATAGAATCTCAAT T |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 16 | 18 | 0 | 5 | 39 |
| Probe ID | Probe Sequeces |
| yueji_09440 | GCCATAAATGTCTGTTATCCCCAGCATTTTGATCAAATTTTTTGGTTTCTGGATAGTCCA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO24058 | unnamed protein product [Vitis vinifera] | 458 | 6e-044 |
| CAO17174 | unnamed protein product [Vitis vinifera] | 454 | 2e-043 |
| CAN71030 | hypothetical protein [Vitis vinifera] | 451 | 4e-043 |
| CAN79327 | hypothetical protein [Vitis vinifera] | 450 | 5e-043 |
| CAA67923 | ubiquitin-like protein [Arabidopsis thaliana] | 448 | 8e-043 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| P55852 | Ubiquitin-like protein SMT3 | 444 | 2e-043 |
| P55857 | Ubiquitin-like protein SMT3 | 412 | 1e-039 |
| O13351 | Ubiquitin-like protein pmt3/smt3 | 276 | 6e-024 |
| Q9Z172 | Small ubiquitin-related modifier 3 | 240 | 9e-020 |
| Q5XIF4 | Small ubiquitin-related modifier 3 | 239 | 1e-019 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9IAK0 | Predicted protein | 481 | 1e-046 |
| B9GTT9 | Predicted protein | 478 | 3e-046 |
| B9GTT8 | Predicted protein | 472 | 1e-045 |
| A7PX89 | Chromosome chr12 scaffold_36, whole genome shotgun sequence | 458 | 6e-044 |
| A7QZ01 | Chromosome undetermined scaffold_260, whole genome shotgun sequence | 454 | 2e-043 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT4G26840.1 | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag | 444 | 2e-044 |
| AT5G55160.1 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | 439 | 8e-044 |
| AT5G55160.2 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | 349 | 2e-033 |
| AT5G55170.1 | SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag | 253 | 3e-022 |
| AT5G55856.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag (TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124; Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). | 235 | 4e-020 |
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