Member Information |
| GCACATTTCTCATCTCATACTCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGGATTTAGGGTTTCTTGTTTTCTCTCT ATCGTTGTATATCCCCGTACGGAGAACCAATCGACGACGATGGGGTCGATCCCCGATCCCGGCGAGTTGACGGAGTTGACTC CGCCGAGCTTCGACGAGTTCCAGAGGCAGACGTCTCTGATGACCAGCTGTACTCTCCTCTGGAAGGAGCTCTCCGACCACTT CCTCTCGCTCGAGCAGAACCTCCTCCAGAATCGGAGGCCATCAAGCGCAAAATCCAGACCCTGGAGCACGAGACCAAGGAGA GCCTCGACGAGCTCGAGCAGAGGGAGATCACCATCAACCAGAGCGTCGAGATCGCGCTCGTCAAGGTCGAGGAGACCAAGAA GGCCGCGCTCAAGGTGTTGAAGAGAGCCCGCTCCGACGACGAGTACGGCGAGGTGGACAACAGCGAGGGGTTGCTGATGGAG ATGAAGTCGCTGTGCTTGAAGATGGATTCCGGAAGGTTCTGGAGGTTTGTGACTGGGAGGAAGAAGGAGCTGGAGGCTCTGA GGGCGCAAATGGCTTCGGCTTTGGTGGAGTGTGTGGATCCGGCGAAGTTTGTGCTGGAGGCGATCTCGGAGGTGTTTCCGGT GGATAAGAGGTCGGAGAAGAGTGATAGGGGGAATGATTTGGGCTGGGCCTGTGTTCTGATGCTGGAATCGCTGATTCCGGTG GTGGTTGACCCCAAGATTGGGAAGTCGAGGCTGTTGGTGACCCCGAGCGTGAAGAAACGCGCCAAGGAGATTGCGGAGACTT GGAAGGCCAGTTTGGAGGAGAGAGGGGGGATTGAGAATGTGAAGACTCCTGATGTTCATACATTTCTGCAGCATTTGGTGAC TTTTGGGATTGTCAAGGAGGAGGATGTGGATTTGTACAGGAAGCTTGTGGTTAGTTCGGCCTGGCGCAAGCAGATGCCTAAG CTTGCCGTTTCGCTTGGCTTAACCAAGAAAATGCCTGATATGATTGAAGAATTGATCAGCAGGGGACAGCAGCTTGATGCAG TGCATTTCATTTATGAAGTTGGCCTTGTCCACAAGTTTCCTCCTGTTCCTTTGCTGAAAGCTTTCCTGAGAGATGCCAGGAA GGCTGCAGCTTCTATTTTGGAAGATGCCAATAGTCCTGGGAAAGCTGCGAACTTAGCTGGACGCAAAGAGCAGTCAGCACTC CGAGCTGTCATCAAGTGTATTGAGGATTACAACCTTGAAGCAGAGTTTCCTCCAGAAAACCTCAAGAAGCGCTTGGAACAGC TAGACCAAAAGGTGAAACCAGAGAAGAAAAAGCCTGTTGCAGCCCCTGCCAACAAACGTACACGAGCCAACCATGGAGGTCC CATGCCTCCAGCCAAGGCGGGACGCTTGGCAAATGCATATGTTTCATCTTTCCCTTCTCCTCCTACATTTGTCCGGTCTCCC TCCCATGCTCAGTATCCTGCTGGGTTCTCACCATACCATTCCCCACCGACAATGTATGGCAGCAGAAGCCCACAGACCAACT CTTATGGAAGCCCACAGACCAACCCTTATGGGAGCCCACAGACCAACCCGTATGCAAGCCCACCAGCCAACCATTATGCATA CTCACCGGAAGCAGCCAGCCCTTATGCATACTCACCTGAAGCAGCCCCTCCTCAACTTGCTGGACCATACCCAGGAGCTCCC ATGAACTATCCTGTATACAGTGGTTATGGCAATGGCATGGCACCAGCTTATCAGCAGGCTTACTACAGATAGATATGACAAC TCTGTGAAGATGGTAACCACTGATACGATGACTCCTGAATCTCATCTACTTTTATAATGGCTTGTTTGTAATCTCTAACCGT TTAATGGTAGCGATGTCTGTGTGTTAATCATGAAATTTCTCATGCTTCTTGCTTTTCACGTGGTGGGAAGTTGTATTTCTAA TGTTGATCAAACCCTAGTACTAGATGAATGTGAAAAGTTGTAGGATGACTTGAAAACATCGACTCTAAGGTACCACCACTGT TGTTCAGTTTAGTTGTAGAAGACTGTTCTTACTGTTCTGTAAAAAAA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 101 | 34 | 3 | 2 | 140 |
| Probe ID | Probe Sequeces |
| yueji_05977 | TAAGGTACCACCACTGTTGTTCAGTTTAGTTGTAGAAGACTGTTCTTACTGTTCTGTAAA bl2seq |
| yueji_12286 | AACCTCAAGAAGCGCTTGGAACAGCTAGACCAAAAGGTGAAACCAGAGAAGAAAAAGCCT bl2seq |
| yueji_13168 | TTGGTTCTCCGTACGGGGATATACAACGATAGAGAGAAAACAAGAAACCCTAAATCCAAA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAN69766 | hypothetical protein [Vitis vinifera] | 1718 | 2e-189 |
| CAO71171 | unnamed protein product [Vitis vinifera] | 1684 | 2e-185 |
| AAL31182 | AT4g14900/dl3490c [Arabidopsis thaliana] | 1519 | 2e-166 |
| NP_567447 | hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] | 1519 | 2e-166 |
| NP_566709 | hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] | 1516 | 6e-166 |
Swiss-Prot top hits |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| no blast result! | |||
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A5B745 | Putative uncharacterized protein | 1606 | 2e-176 |
| A7NWN2 | Chromosome chr5 scaffold_2, whole genome shotgun sequence | 1578 | 3e-173 |
| B9HJY2 | Predicted protein (Fragment) | 1542 | 5e-169 |
| B9RTR7 | Protein FRIGIDA, putative | 1540 | 9e-169 |
| Q8W4S7 | AT4g14900/dl3490c | 1393 | 1e-151 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT4G14900.1 | hydroxyproline-rich glycoprotein family protein | 1393 | 7e-154 |
| AT3G22440.1 | hydroxyproline-rich glycoprotein family protein | 1387 | 4e-153 |
| AT5G48385.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | 365 | 1e-034 |
| AT1G31814.1 | FRL2 (FRIGIDA LIKE 2) | 249 | 3e-021 |
| AT5G27230.1 | INVOLVED IN: biological_process unknown; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 7968 Blast hits to 5791 proteins in 512 species: Archae - 158; Bacteria - 808; Metazoa - 2750; Fungi - 421; Plants - 1028; Viruses - 76; Other Eukaryotes - 2727 (source: NCBI BLink). | 247 | 5e-021 |
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