RU05335 sequence (1372 bp)


Member Information
TTTTGGAAACAGTAATTTTATAATATATTATTACCAACAAGCTTGCCCCAAATTGGTCAGACAGCAAAGTTTTTACACTCTA
TGCAAAGGGGTACTAGTAATCATTAATTTTGCAAAGCAAGCTTGATAAGCTAAAAGAAGCGAGTGCTCGAGAGCACGCACGC
ACAACTCTAATGTTCAGAGTTAATTATGACATAAATCCATACTATTACAAGTTGATGATCGGTTTGTTTTGCTCAGAATTAT
AAAAATGAAAACATAATGAAACAAACATAAACATACAGCTCACAGCTGCAAACATCATAACGTGCATGCATGGCTTCACCAC
ACAGAGTTGCTTGCTCTCTGTGTTCTTATTTATCATGGCAACCATCCTCCCATGTAATTCACGCTCGGCCCGGCCGTCACAA
CTTGTATCGGATCATTCTGGTGATACCCAATTTGTAACGTGGGCTCGCACTCTAAGGGTTGGAAGAAGCCCTCGCCCTGAGG
TTGATGATGAGCTTGTTGCCGGCCATATCCCACATCCTCAGCATTTGCATTCAGTTGGAGTTGATGTACATTGTATCCCTCA
AACAACCTTTGTTTCAGTGTCCTGTTTGCTTCATTAAGCATGTGTTCCTTTCGCTGAAGATCTGTGAGCTGATCCAGCATGC
ATTGGGTCCGTGTTGATCTGATCTGCTTCAATGACATGTCCAGCTGCCTTTCAAGTGATTCAAGCTCTTTGCTACTTAAAGG
GCCAAGATCTTCTCCAAGAAGATTCCTTTGGTTTCTTTGTAGGGCTTCATAACGTGCCTTGAGCTTCAAATACTCCTGCTGG
CTGCTCAATTCCAAGGCCTCCCTTGTAGATACATTTGTCTCCGGTGCTCCATAGTTGCACTTCTGGTACCTCTCAAGTGTTT
TGAGCATGCTTGAACTACTGCAAAACTCGTACAGCTTTCCTCTATTGGAGAAGATGATGAGAGCAACCTCGGCATCGCAAAG
AACGGAAAGCTCGTAGGCTTTCTTCAATAGTCCGTTCCTTCTCTTTGCAAAGGTCACCTGCCTGTTGATCTTGTTCTCAATC
CTCTTCAGCTCAACTCTCCCCCTCCCCATTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTACAACAATATTAGTACTTTCCC
ACTAGCCCAACCACAATACCACAAAAGCAAACCTCTCCTTGGTTTAATCCGCTATATATATGACGACCACCTCCTGCAATAA
TTAATTATATTCAATTCATAATTCTAAATCCTCCCAATTTCCATTACCACCTTGTTTCAGAATCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCAAACTCTCAAACTATCTCTCTGCTTTCAAAAACCGCGTTTTTGGAAAAAA


RU05335 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
11182233

Probe ID Probe Sequeces
yueji_09840CTTTACAAGTGATTCAAGCTCTTTGCTAACGTTAAAGGGCCAAGATCTTCTACCAAGAAG bl2seq
yueji_11795TAGAGTGCGAGCCCACGTTACAAATTGGGTATCACCAGAATGATCCGATACAAGTTGTGA bl2seq


RU05335 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAO66140 unnamed protein product [Vitis vinifera] 1084 4e-116
AAM21344 MADS-box protein 4 [Vitis vinifera] 1077 3e-115
ABO27621 transcription factor MADS5 [Prunus persica] 1069 2e-114
BAF44101 transcription factor MADS [Pyrus x bretschneideri] 1055 9e-113
AAX13298 MADS box protein SEP3 [Lotus corniculatus var. japonicus] 1021 8e-109

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q03489 Agamous-like MADS-box protein AGL9 homolog 991 2e-106
O65874 MADS-box transcription factor 1 961 6e-103
O22456 Developmental protein SEPALLATA 3 872 1e-092
O04067 Agamous-like MADS-box protein AGL9 homolog 852 2e-090
Q38694 Agamous-like MADS-box protein AGL9 homolog 811 1e-085

TrEMBL top hits
Blast detail
Accession No. Description Score e value
Q2EN84 SEP3-like MADS-box protein 1077 2e-115
Q2EMR8 MADS-box protein SEP3 1072 9e-115
Q2EMR9 MADS-box protein SEP3-1 1054 1e-112
A7QP32 Chromosome chr1 scaffold_136, whole genome shotgun sequence 1048 6e-112
Q8LLR0 MADS-box protein 4 1041 4e-111

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor 873 9e-094
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor 872 1e-093
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor 731 3e-077
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor 718 8e-076
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor 717 1e-075