RU05336 sequence (1564 bp)


Member Information
GAAGGGCTGGCGCTTCATAACATAGCCACAGCCCAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGCTTCTCTTTCA
GGTTTAGGAACAATGGGTGCTGGTGGAAGAATGTCTGCACCCCCAACTCGCAAGAGTGCAGAAACTGACAACATCAAGCGAG
TGCCACACCTGAAACCTCCATTCACTCTTGGCCAAGTCAAGAAAGCCATCCCACCTCACTGTTTCCAGCGCTCCGTCATCCA
CTCTTTCTCCTATGTCGTCTATGACCTCGCAATTGCCTCCATCTTTTATTACATTGCTTCAAATTACATCAACCACCTCTCG
ACCCCTCTCTCATTCTTGGCATGGCCAATTTACTGGGCTCTTCAGGGCTGTGTCCTAACTGGTGTCTGGGTCATTGCACACG
AGTGTGGTCACCATGCCTTTAGCGATTATCAATGGCTTGATGACACAGTTGGCCTAGTCCTGCACTCCTGTCTTCTCGTCCC
CTACTTCTCTTGGAAGTATAGCCATCGCCGCCACCATTCTAACACAGGTTCCCTTGAGCGAGATGAAGTCTTTGTCCCAAAA
CAGAAGTCTGCTATGGGATGGTACTCCAAATACCTTAACAACCCACCAGGCAGAGTCCTTACTCTAACTGTCACACTCACTC
TTGGCTGGCCTTTGTATTTGGCATTTAATGTTTCTGGAAGGCCCTATGACGGCTTTGCTTGCCACTACCATCCATATGGCCC
TATCTACTCCGATCGTGAACGTTTGCAGATATACATTTCGGCTGCTGGTGTTCTTGCAGTCTGTTATGGGCTTTACCGTCTT
GCTGTTGCAAAAGGGCTTGCCTGGGTCTTGTGCTTCTATGGAGGTCCCTTGTTGGTGGTGAATGCGTTTTTGGTTTTAATCA
CATATTTGCAGCACACCCACCCTTCATTGCCACACTATGATTCATCCGAATGGGACTGGTTGAGAGGAGCCTTGGCAACTGT
TGACAGAGACTATGGAATCTTGAACAAGGTCTTCCATAACATCACAGACACTCATGTCGCTCACCATTTGTTCTCAACCATG
CCACATTATCACGCAATGGAGGCCACAAAGGCAATCAAGCCGATATTGGGCGAGTATTATCAGTTCGATGGGACTCCATTTT
ACAAAGCAATGTGGAGGGAAGCAAAGGAGTGCATCTACGTTGAGCCAGATGAAGTTGATAAGAAGGGTGTCTTCTGGTACAA
GAATAAGCTGTAATTCTGATAAAAGTTGTTGAACAAGCTTGTTGGGAAGCTTTAGATTCCAGTCATCAGAAGTTCAGAACTC
AGCTTCCCTGTCTTGATAATGTAGGTTTCTTTCTGCTGTTTTGAACTACTTATCATAATAGTTGTGTGGCTTTCAATAATTC
TTTTGACCCGTAATTATCTTAGGAACTAAGATTACAAGCTATGGTCTGGCGTATGTTTTGTTTGTTTCTTAAGTATAGAGCT
TGCAAGAGGCCCAATCCAAATGGAACTTGCTTGTCGATCTAAATTTGGAATATGTATACATGGTTGCTAGAAGCTTTTCTTT
GTTGTT


RU05336 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
595133116

Probe ID Probe Sequeces
yueji_07072TAACACAGGTTCCCTTGAGCGAGATGAAGTCTTTTGTCCCAAAAACAGAAGTCTGCTATG bl2seq


RU05336 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAV52834 delta-12 fatty acid desaturase [Tropaeolum majus] 1824 7e-202
AAN87573 delta 12 oleic acid desaturase FAD2 [Vernicia fordii] 1813 1e-200
AAY87459 omega-6 fatty acid desaturase [Hevea brasiliensis] 1810 3e-200
ABK59093 oleate desaturase [Ricinus communis] 1795 2e-198
ABL86147 delta-12 oleic acid desaturase [Vernicia montana] 1793 3e-198

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P46313 Omega-6 fatty acid desaturase, endoplasmic reticulum 1685 7e-187
P48631 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 1677 6e-186
Q39287 Omega-6 fatty acid desaturase, endoplasmic reticulum 1658 1e-183
P48630 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 1544 2e-170
O81931 Delta(12) fatty acid dehydrogenase 1212 5e-132

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q8GZC3 Delta 12 oleic acid desaturase FAD2 1766 4e-195
Q5S3X7 Delta-12 fatty acid desaturase 1763 8e-195
A1YZD3 Delta-12 oleic acid desaturase 1750 3e-193
Q461Q1 Omega-6 fatty acid desaturase 1750 3e-193
A0T1K2 Oleate desaturase 1744 1e-192

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G12120.1 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase 1685 7e-188
AT3G12120.2 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase 1685 7e-188
AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase 600 5e-062
AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase 568 2e-058
AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase 557 4e-057