RU05538 sequence (264 bp)


Member Information
GGAGATGGTGGTGGCAAGTGATGGTAGGGAGGTGGTGGTGGCGGCGAGGACTCAGGACATGGTGGTGGTGAATGGCGGCGGC
GGCGGCGGGGGTAATTCAATGCAAAGGAGGTGGTGGTGGGGGCGGTTCTATACAAGGAGGTGGGGAAGGGGGAGGTGGGGAA
TGGACAGGTGGTGGAGGTGGAGGTGATGAGTAAGGATAAATTGGTGGTGGTGGTGAATGTGGCGGTGGCGGTGGTGAATGTG
GAGTAGGAGGCGGGGGTG


RU05538 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
31004

Probe ID Probe Sequeces


RU05538 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
YP_293958 hypothetical protein EhV204 [Emiliania huxleyi virus 86] 222 4e-017
YP_002296212 putative membrane protein [Emiliania huxleyi virus 86] 222 4e-017
BAC57890 pherophorin [Volvox carteri f. nagariensis] 221 5e-017
CAD22154 pherophorin-dz1 protein [Volvox carteri f. nagariensis] 221 5e-017

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P21260 Uncharacterized proline-rich protein (Fragment) 213 3e-017
P21997 Sulfated surface glycoprotein 185 204 3e-016
P06599 Extensin 199 1e-015
Q9S8M0 Chitin-binding lectin 1 191 9e-015
Q9FLQ7 Formin-like protein 20 186 4e-014

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9RPC0 LRX1, putative 273 4e-023
Q4A2S9 Putative membrane protein 222 4e-017
Q852P0 Pherophorin 221 5e-017
Q8L685 Pherophorin-dz1 protein 221 5e-017
B7P5E7 Putative uncharacterized protein (Fragment) 219 8e-017

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G13340.1 leucine-rich repeat family protein / extensin family protein 246 3e-022
AT2G15880.1 leucine-rich repeat family protein / extensin family protein 226 7e-020
AT3G22800.1 leucine-rich repeat family protein / extensin family protein 209 7e-018
AT4G33970.1 protein binding / structural constituent of cell wall 208 9e-018
AT3G19020.1 leucine-rich repeat family protein / extensin family protein 204 2e-017