Member Information |
| TTTTTTTTTCTCTGTAATGAAAAAGGTACTTTATTACTTGTGGGACTTGCTCATTATGTGCAGCAAGCCATCAATCACAACT GTTTATACAAAAGTACTGGTTAAACAGAAGTTTGAGCTTCAATCCTCAACTACATAATACACGCCAATGCTATATTTTGAAG TCTAAACAATCAAACTATTTAAACCGGAGTGATCCAATTTATTGTAGGTATCGTAATATCGCGAACATTTTGAGCAGGCAAT TAGCTAGGAGGCTTTAGTGTTTGGTTTTAGGCCTCTTCACGATCATAACACTGCAGTGAGCGTGATGAGCACAATAGTCACT TACACTTCCCAAAACCGCCCTTTTGATGGCTCCATAGCCATGACTACCCAGAACCAAGACGGATGCATGGTGTCTTTCCACA GCATCACAGAGTACATTCCTGGCATCGCCTTCTATCACCTCTACGACCACATCTTTTACCGATTTAGAATCACAAAATTCCT TGGCCTTCTCACTAACGCGGCCAGCCTGCCTCTTCAAATCAGCATCCACAATCGGCAGAACCTCCGCCGCGCCGGGACCGGC GAGGCCGACGACAGAGGAAGGCATGGGCTTGGCGTGGACGATGACGAGCTTGAACGGCGTGTTGGGGCCGAACGGGGTGACG AAGTGTTCCAGAGTCCACTCCAGAGCGTAGGCGCTGTGCTCGCTCTCGTCGGCCGCCACAACCATCACTTGCTTCTCTGCCA TGGATAACTTCTCTGTTTTTCTCTCACTCTTCACAAAAACAAAACCCTTCGATCTTTGCTTCTTCTTCTTCTTCTGGCTTGT GTTTGATTTCGATCACTGTCTGAT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 33 | 24 | 2 | 3 | 62 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO40001 | unnamed protein product [Vitis vinifera] | 646 | 1e-065 |
| CAO40000 | unnamed protein product [Vitis vinifera] | 640 | 6e-065 |
| AAR07598 | fiber protein Fb19 [Gossypium barbadense] | 616 | 4e-062 |
| NP_566108 | universal stress protein (USP) family protein [Arabidopsis thaliana] | 593 | 2e-059 |
| ABV89633 | universal stress protein family protein [Brassica rapa] | 588 | 6e-059 |
Swiss-Prot top hits |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| no blast result! | |||
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9SAP9 | Putative uncharacterized protein | 635 | 2e-064 |
| A7Q0B6 | Chromosome chr7 scaffold_42, whole genome shotgun sequence | 590 | 3e-059 |
| A7Q0B5 | Chromosome chr7 scaffold_42, whole genome shotgun sequence | 585 | 1e-058 |
| Q6T7D1 | Fiber protein Fb19 (Fragment) | 569 | 9e-057 |
| B4UW73 | Universal stress protein | 564 | 4e-056 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT2G47710.1 | universal stress protein (USP) family protein | 549 | 2e-056 |
| AT5G49050.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: universal stress protein (USP) family protein (TAIR:AT2G47710.1); Has 83 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 264 | 2e-023 |
| AT3G11930.2 | universal stress protein (USP) family protein | 262 | 3e-023 |
| AT3G58450.2 | universal stress protein (USP) family protein | 215 | 9e-018 |
| AT3G11930.1 | universal stress protein (USP) family protein | 207 | 8e-017 |
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