Member Information |
| GGGTTCAACATCATGCACGCGGTTAACGCATGGGACGAAGACGACGCCGTTGTGATGGTGGCGCCGAACATCTTATCGGCGG AGCACACTCTCGAGAGACTGGAGCTCGTCCACGCGCTCGTGGAGAAGGTGAGGATCGATCTCAAGACCGGGATCGTTTCGCG CCAACCGATCTCGACCCGGAATCTGGACTTTGCGGTGATAAACCCGGCTTACCAGGGGAAAAAGAACCGGTTCGTGTACGCG GGCGTCGGGGATCCGATGCCGAAGATATCGGGAGTGGTGAAGCTCGACGTGTCGGGTGATGAGCACAAGGAGAGCATAGTGG CGAGCAGGATGTACGGTCAGGGTTGCTTCGGGGGAGAGCCGTTTTTCGTGGCGAGGGATCCGGATAATCCGGAGGCGGAGGA GGACGACGGGTACGTGGTGTCGTATGTTCATGATGAGAAGACGGGAGAGTCGAGGTTTTTGGTGATGGACGCCAAGTCGTCT GAGCTGGAAACCGTGGCGGAAGTTAAGCTGCCGCGGCGGGTGCCGTACGGTTTTCACGGTCTGTTTGTGAGGGAGAGTGACC TGAAGAAGTTGTAGTTGACGGCGTTTAACCACCACATGTTGTGATATATATATATATATATATATATATATATATATATAAC CTTTTGGGTTAGATTAATTTTGCGAGTCGCAATAACTTCT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 7 | 5 | 0 | 0 | 12 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| ABY60886 | carotenoid cleavage dioxygenase 4 [Rosa x damascena] | 1003 | 3e-107 |
| CAB07784 | hypothetical protein [Malus x domestica] | 846 | 5e-089 |
| ABY47995 | carotenoid cleavage dioxygenase 4 [Malus x domestica] | 844 | 9e-089 |
| CAO63730 | unnamed protein product [Vitis vinifera] | 834 | 1e-087 |
| ABK96278 | unknown [Populus trichocarpa x Populus deltoides] | 829 | 5e-087 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| O49675 | Probable carotenoid cleavage dioxygenase 4, chloroplastic | 804 | 3e-085 |
| Q84K96 | Zeaxanthin cleavage dioxygenase, chromoplast | 593 | 9e-061 |
| Q9LRM7 | 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic | 334 | 1e-030 |
| Q9C6Z1 | Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic | 328 | 5e-030 |
| Q9LRR7 | 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic | 322 | 2e-029 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B0FLM8 | Carotenoid cleavage dioxygenase 4 | 1003 | 3e-107 |
| O49895 | Putative uncharacterized protein | 846 | 5e-089 |
| A9Z0V8 | Carotenoid cleavage dioxygenase 4 | 844 | 9e-089 |
| B9H4M8 | Predicted protein | 838 | 4e-088 |
| A7QKL0 | Chromosome chr2 scaffold_113, whole genome shotgun sequence | 834 | 1e-087 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT4G19170.1 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | 805 | 3e-086 |
| AT3G24220.1 | NCED6 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6); 9-cis-epoxycarotenoid dioxygenase | 334 | 1e-031 |
| AT1G30100.1 | NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5); 9-cis-epoxycarotenoid dioxygenase | 328 | 5e-031 |
| AT3G14440.1 | NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3); 9-cis-epoxycarotenoid dioxygenase | 322 | 3e-030 |
| AT1G78390.1 | NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9); 9-cis-epoxycarotenoid dioxygenase | 318 | 8e-030 |
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