RU05840 sequence (877 bp)


Member Information
GCACGAGCTCTCTCTGTCTGTCTCTCTCTCTCTCTGATCGATCACACTCCTCCATTTTCCCTCACACTAAAACCAATACACC
CATTCTCATCTTGGCCTCAATCTTCTGCAACAACCATGGCCAATGCGGCGTCGGGATTTGCTGTGGATGATGATTGCAAACT
AAAGTTCTTGGACTTGAAGGCCAAAAGAACTTACCGCTTCATAGTATTCAAGATTGAGGAGAAGCAGAAGCAGGTGATTGTG
GAGAAATTAGGTGAGCCAGCTCAAAGCTATGAAGATTTCACTGCAAGCCTTCCAGCTGATGAATGCAGATATGCTGTCTATG
ATTTTGATTTTGTGACTGCTGAAAACTGTCAGAAAAGCAGGATTTTCTTCATTGCATGGTCCCCTGATACATCAAAGGTGAG
AAACAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAGAATTGGATGGTATCCAAATAGAGCTGCAGGCCACTGAC
CCAACTGAGATGGATCTTGATGTTATCAGAAGTCGTGCCAGCTAAGAAGTTGTGTTTGCAATGGCGATTTTCCTTAAGTTTC
TTTTTTCAATTTATGCCAATGTTAATAGTTTGTGGGGCTGTGAACCTAACTGAATTATGATACTTGGTTTGCTATTAAATGT
TTATCTTCATGTAGAACGAATTCAGTTGTCTCAATTTATATAGGATGATGGACGGACTTGGGCGATGAATTTAAGTCCTAGT
GTCTCCCAAATTTTTATATTTGGAGACCGAGTTGTATCATCTTCTTAAGGTAGAAATCTGGGTTTGTGTTTGCAACTTCAGA
AAGGTGTGGTTTGCTATCCTTAATTAAGCAAAAATCGGATGAGCTGTTATGCTGTAG


RU05840 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
12190435

Probe ID Probe Sequeces
yueji_01156TGTCAGAAAAGCAGGATTTTCTTCATTGAACATGGTCCCCTGATACATCAAAGGTGAGAA bl2seq
yueji_14480CCATGGTTGTTGCAGAAGATTGAGGCCAAGATGAGAATGGGTGTATTGGTTTTAGTGTGA bl2seq


RU05840 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABK92579 unknown [Populus trichocarpa] 658 5e-067
ABK96064 unknown [Populus trichocarpa] 657 7e-067
ABD66504 actin depolymerizing factor 8 [Gossypium hirsutum] 655 1e-066
CAL25339 actin-depolymerizing factor [Platanus x acerifolia] 650 4e-066
ABK93478 unknown [Populus trichocarpa] 650 4e-066

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9FVI1 Actin-depolymerizing factor 2 551 1e-055
Q9ZSK3 Actin-depolymerizing factor 4 551 1e-055
Q39250 Actin-depolymerizing factor 1 549 2e-055
Q9FVI2 Actin-depolymerizing factor 1 547 3e-055
Q0DLA3 Actin-depolymerizing factor 7 527 6e-053

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9T4D2 Actin depolymerizing factor, putative 592 2e-059
A9P876 Actin depolymerizing factor 1 580 5e-058
A9PIW8 Putative uncharacterized protein 580 5e-058
A9PI61 Actin depolymerizing factor 5 579 7e-058
Q4JHK7 Actin depolymerizing factor 577 1e-057

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G59890.1 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding 552 8e-057
AT3G46010.1 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding 550 1e-056
AT3G46010.2 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding 545 5e-056
AT5G59890.2 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding 525 1e-053
AT5G59880.1 ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin binding 517 9e-053