Rose Transcriptome Database
RU05847 sequence (693 bp)
CCAACCCTCTCTCTCTCACTCTCTCAAATCAGACTAGGTCATTTTTAGGGTTTCGTCGTTAAATTTGTGTGTGATTTTCGCC
GCCGGATTCAGAAAATGAGTGGAAAGGAAGGTGGGTCGACTAAGGGAGGCAGAGGCAAGCCGAAGGCCACCAAGTCTGTGTC
CAGGTCTAGCAAAGCCGGGCTTCAATTTCCGGTGGGTAGGATCGCCCGGTTTCTCAAGTCCGGCAAGTATGCCGAGCGTGTC
GGCGCCGGAGCTCCGGTTTATCTCTCTGCCGTGCTTGAATACTTGGCAGCTGAGGTTTTGGAGCTTGCTGGCAACGCAGCTA
GAGACAACAAGAAGAATCGTATAGTACCGAGGCACATTCAGCTTGCGGTGAGGAATGACGAGGAGCTAAGCAAGCTTTTGGG
GTCTGTGACTATTGCCAATGGAGGAGTTTTGCCCAACATTCACCAAACTCTTTTGCCTAAGAAGGTTGGGAAAGGCAAGGGC
GATATCGGATCCGCTTCTCAGGAGTTCTAGTGTTGTTGCTCTGTGTTTATCTCCTTGTATGGAGATGTTTAGTTACCTCAGT
TGTAAAATACCATGGGATTTGTTAGAGTTTTCTTTGAACCTTGTTGTTCTGGTGCTTGGGATCTTATGCTATAAATGAATGG
TTCTGCTAAATTGAATCTGGTTTTAGTCAAAAAAAAA
|
RU05847 Expression
| Control | Ethylene | WDS | GenBank | Total |
|---|
| 7 | 10 | 0 | 1 | 18 |
| Probe ID |
Probe Sequeces |
| yueji_02577 | GTGTTTATCTCCTTGTATGGAGATGTTTAGTTACCTCAGTTGTAAAATACCATGGGATTT bl2seq |
| yueji_14553 | CTTCCTTTCCACTCATTTTCTGAATCCGGCGGCGAAAATCACACACAAATTTAACGACGA bl2seq |
| yueji_14648 | TTTAAATTTGTGTGTGATTTTCGCCGCCGGATTCAGAAAATGAGTGGAAAGGAAGGTGGG bl2seq |
RU05847 Annotation
| Accession No. |
Description |
Score |
e value |
| NP_175868 |
G-H2AX/GAMMA-H2AX/H2AXB/HTA3; DNA binding [Arabidopsis thaliana] |
655 |
7e-067 |
| NP_172363 |
G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding [Arabidopsis thaliana] |
655 |
7e-067 |
| ABN08174 |
Histone H2A; Histone-fold [Medicago truncatula] |
653 |
1e-066 |
| CAN70026 |
hypothetical protein [Vitis vinifera] |
652 |
2e-066 |
| O65759 |
Histone H2AX |
646 |
8e-066 |
| Accession No. |
Description |
Score |
e value |
| O65759 |
Histone H2AX |
501 |
4e-050 |
| O04848 |
Probable histone H2AXa |
500 |
6e-050 |
| Q9S9K7 |
Probable histone H2AXb |
497 |
1e-049 |
| P35063 |
Histone H2AX |
482 |
7e-048 |
| A2ZL69 |
Probable histone H2AXb |
469 |
2e-046 |
| Accession No. |
Description |
Score |
e value |
| B9MZP0 |
Histone 2 |
505 |
2e-049 |
| B9I828 |
Histone 2 |
503 |
3e-049 |
| A2Q3H4 |
Histone H2A |
502 |
4e-049 |
| A5BCX3 |
Histone H2A |
498 |
1e-048 |
| B9REZ0 |
Histone h2a, putative |
491 |
7e-048 |
| Accession No. |
Description |
Score |
e value |
| AT1G08880.1 |
H2AXA; DNA binding |
501 |
5e-051 |
| AT1G54690.1 |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
498 |
1e-050 |
| AT4G27230.1 |
HTA2 (histone H2A); DNA binding |
416 |
3e-041 |
| AT5G54640.1 |
RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding |
412 |
9e-041 |
| AT3G20670.1 |
HTA13; DNA binding |
409 |
2e-040 |