RU05851 sequence (656 bp)


Member Information
GCGCAGGAACTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACATATATTTCGAGGCCAGCCCAAGAGGCATC
TTCTCACAACTGGATGGAGCGTGTTTGTTAGTGCTAAACGACTTGTTGCCGGTGATTCTGTCCTTTTTATTTGGAATGAAAA
GAATCAGTTGCTCTTGGGTATTCGGAGAGCAAATCGTCCGCAGACTGTTATGCCATCGTCGGTTTTATCAAGCGATAGCATG
CATATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGTCGGTTTACTATATTTTATAATCCAAGAGCAAGTC
CTTCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCTGTCTATCATACACGTGTTTCTGTGGGAATGCGATTTAGGAT
GCTGTTTGAGACAGAAGAATCAAGTGTTCGCCGATACATGGGTACAATAACTGGCATCAGTGATTTAGATTCTGTTCGCTGG
TCAAATTCACACTGTCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCATTGTGGG
AGATTGAACCGCTAACAACTTTTCCCATGTACCCTTCCCCATTCCCTCTCAGACTGAAGCGACCATGGCCATCAAGCAGAAT


RU05851 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
23005

Probe ID Probe Sequeces
yueji_00897AGAGTTTCATTGTGGGAGATTGAACCGCTAACAACTTTTCCCATGTACCCTTCCCCATTC bl2seq
yueji_12242AATAACTGGCATCAGTGATTTAGATTCTGTTCGCTGGTCAAATTCACACTGGCGCTCTGT bl2seq


RU05851 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
BAD19063 auxin response factor 3 [Cucumis sativus] 1108 2e-119
CAO40364 unnamed protein product [Vitis vinifera] 1105 4e-119
CAO69961 unnamed protein product [Vitis vinifera] 1103 7e-119
NP_174323 ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor [Arabidopsis thaliana] 1096 5e-118
NP_001031115 ARF6 (AUXIN RESPONSE FACTOR 6) [Arabidopsis thaliana] 1096 5e-118

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9ZTX8 Auxin response factor 6 1059 8e-115
A2X1A1 Auxin response factor 6 1053 4e-114
Q6H6V4 Auxin response factor 6 1053 4e-114
A2YG67 Auxin response factor 17 1051 7e-114
Q653U3 Auxin response factor 17 1051 7e-114

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9T414 Auxin response factor, putative 1072 3e-115
Q6L8U1 Auxin response factor 3 1071 4e-115
A7Q186 Chromosome chr10 scaffold_43, whole genome shotgun sequence 1068 8e-115
A7PJQ8 Chromosome chr12 scaffold_18, whole genome shotgun sequence 1066 1e-114
Q5IRX9 ARF6 1059 9e-114

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G30330.1 ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor 1059 8e-116
AT1G30330.2 ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor 1059 8e-116
AT5G37020.1 ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor 974 6e-106
AT5G37020.2 ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor 974 6e-106
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator 754 2e-080