RU05949 sequence (1466 bp)


Member Information
TTCACGGACGGNTAACANTTGCATTTTAAAAAGAACCCATGAGACAGGCACTCCCTAAATAATTCATCATTTCATTAATAAT
GAAGATAAAATAAAAAAAGGTCGGTAGGAAGGAAGGAACTGAACCAATCAGAACTCAGAAAGAGATCCGTGATCTTTTTTTA
ATAAAAATAAGACATATAAAAACAACGGTCTAGGCTCCAGCGCTGCAGCTCAAAAGTCCCATAGAATTAACACCAACCCTTT
AGTCGCTTACCCAATTACAAGCCTATAATATAATCCATTCTAAATGCGCGAAGCACCTGATCATCACCACCACCACCAATCA
AAACGTCGGGACGACGCCGTATTGTGCGTCTGCAATATAACTCCCCGGCGCCGAGTTAAAGATCCGATCCATCACCTCCGTT
TCGGTCTCGGTGCGTTTCGCGAACCGGCCTTTGATTCTCGGCCGGGTCTCGGCATAGGCTTTCCGGGAGGCGTATCGGATTG
TCTTCTGGAACTTGCGGTTCTTCCTCTTCTCTCTGTACCTCATCACTCTCGCCTCGCGATCCACTCCGCTCAGCTGGGTCGC
CGTCGCCGTCGCCGGAGCAGCCGCTACGCCGGATTCCACGCCGTTGTGGTTCACGTTTCGGATGAACGGATATGAAATGTCG
GACAATGAATTTCCGTCGGGAACAACTCCCACATCTAAGGAGGACGACGAGACGCTTTGGCTGATTGACTGAGCTGGATAAC
TGAAGGAGGAAGACAGCTTGTTTCGGCAGAAGTCAATGTCGAAGCAATTTTCACGAGGGGGTTGGTTGACGACAGGAGGAGG
TGGAATCGGGTCGGGTTGAACCGGAACCACGCTATCCATACCCGAACTGGAGTTTTGGATCGGGTTCGGGTAATCGAGTTCG
AATAACGATTCCATTTCCGGGAAGAACATATCCCCGGGCTTGACGTCGAGAGCCTCAATGAACTTGGAGCTGAAATTCAGGT
TGGGAATGAGCAGAGAATCGGCGTCGTCGTTTTTAAGAGACGAAACGGCGTCGTTGAGGCCAGCGGCCGAGGTGGATTTGAC
GATGGACTCGGCCGAGTCTAGGAACGGCTCCACGGGGACGCGCTCGTGGCGACGCGCCAGTGGATTGGCGGAGTGGATGTCG
GCGTCGCACGTGACGCAGAGGGCGGCGGCGTCGGCCTTGCACGTGACGGCGGCCGGGGCTTGCTCGCAGACCTCGCACATCC
ACACGCGCTGGTGGCGCGACGCGAGCTTGTTGGCGCAGTGGATCTTGGAGTCGCAGGTCAGGCAGAGGTAGGCCGAGTCGGC
GCGGCAGAAGACGGCCGACGGCGACGACTTGCAGGTGTCGCAGGGCTTGGGGGTGAGCCCCGGCAGGGTCCAACCGGCTTGA
AGTCCCATACCCAAAACGGCGTCGTTGGTTGTAGGGTATATTATTGCTGTGGTTTTTTTTTTTTTGTCTGGG


RU05949 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
16170134

Probe ID Probe Sequeces
yueji_02910TTGAGCTGCAGCGCTGGAGCCTAGACCGTTGTTTCTATATGTCTTATTTTTATTAAAAAA bl2seq
yueji_05493GATCACGGATCTCTTTCTGAGTTCTGATTGGTTCAGTTCCTTCCTTCCTACCGACCTTTT bl2seq
yueji_11867AATTGCTTCGACATTGACTTCTGCCGAAACAAGCTGTCTTCCTCCTTCAGTTATCCAGCT bl2seq


RU05949 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAO14549 unnamed protein product [Vitis vinifera] 903 4e-095
ABH09237 CONSTANS-like protein [Solanum tuberosum] 445 5e-042
Q940T9 RecName: Full=Zinc finger protein CONSTANS-LIKE 4 442 1e-041
NP_197875 zinc finger (B-box type) family protein [Arabidopsis thaliana] 442 1e-041
AAK96601 AT5g24930/F6A4_140 [Arabidopsis thaliana] 442 1e-041

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q940T9 Zinc finger protein CONSTANS-LIKE 4 442 9e-043
Q9SK53 Zinc finger protein CONSTANS-LIKE 3 416 9e-040
Q9FHH8 Zinc finger protein CONSTANS-LIKE 5 412 3e-039
Q96502 Zinc finger protein CONSTANS-LIKE 2 371 2e-034
O50055 Zinc finger protein CONSTANS-LIKE 1 360 3e-033

TrEMBL top hits
Blast detail
Accession No. Description Score e value
A7QWT1 Chromosome chr4 scaffold_208, whole genome shotgun sequence 782 4e-081
B9T618 Zinc finger protein, putative 489 4e-047
C0LLV8 CONSTANS-like protein 476 1e-045
Q0MQL9 CONSTANS-like protein 445 5e-042
B9HB92 Predicted protein 433 1e-040

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT5G24930.1 zinc finger (B-box type) family protein 442 9e-044
AT2G24790.2 COL3 (CONSTANS-LIKE 3); protein binding / transcription factor/ zinc ion binding 416 9e-041
AT2G24790.1 COL3 (CONSTANS-LIKE 3); protein binding / transcription factor/ zinc ion binding 416 9e-041
AT5G57660.1 zinc finger (B-box type) family protein 412 3e-040
AT3G02380.1 COL2 (constans-like 2); transcription factor/ zinc ion binding 371 2e-035