RU05956 sequence (1612 bp)


Member Information
TTTTTTTTTAGCAAAGCTTCTCTCTCTCGTTTGATTCACTTCTTTAAACCAAGTCCAACTTGTTTCTGCATAATCTTTCAAC
CCTTTTCAACTCCCAAGTCCTCTCGATAATGTGTGGAGGTGCTATTATTTCCGATTTCATCCCGCCGACGCGGTCCCGGCGA
GTCACCGCCGACTTGGTCTGGCCTGATTTCAAGAAATCCAGCTCCGGCAAGCGGTTTGCCGCCGGCGGCCGGCCTCTCCGGT
CCGAAATCCTTGGATTGAACGACGATTTCGAGGCTGATTTCCAGGAATTCAAGGACGAGTCTGATGTGGATGACGATGAGGA
GATGGTCGATTCCAAGCCCTTCGCTTTCTCCGCCGGAAAAACGACCTCTTCTGCTGCTCGTGGCTCCAAGACTGTGAAATCT
GTGGAGTGCAATAGCCAAGCTGAGAAATCTGCAAAGAGGAAGAGGAAGAACCAGTATAGAGGAATTCGCCAGCGCCCATGGG
GTAAGTGGGCTGCCGAGATCCGAGACCCAAGGAAAGGAGTCCGGGTTTGGCTCGGAACCTTCAACACTGCTGAAGAGGCTGC
AAGGGCCTATGACGCTGAGGCACGTAGAATTCGTGGCAAGAAAGCCAAGGTGAATTTTCCTGAAGAACCCCCTCGTGCTTCT
GCAAAGCGTGCTGTCAAGGCAAATCCTCAGAAAGTTCTACCCAAAACAAACTTGGACAATATCCAGTCTAATCTAAACCAGA
ACTTCAATTTTGTGAATGGCTCTGATCAAGATTACTACAATTCTATGAGTTTCCTGGAAGAGAAACCCCAAACTAATAATTT
TGGATACATGGACTCTGTCCTTACCAATGGAGACTTTGGGCTGAAATCCTCCACTCTATCTGACCCTGCCCCTCTCTATTTC
AGTTCTGATCAGGGAAGCAATTCCTTTGACTGTTCTGACTTTGGTTTGTTTGAACAAGGTTCAAAGACTCCTGAAATCTCAT
CTGTTCTTTCATCTGTTCTCGAAGAAAATGAGAACTCACTGTTTCTTGAGGATGCTAATCCAACCAAGAAACTGAAGGCTAA
CCCTGAGGATCTTGTGCCTGCTGAGAATAATGTTGTTCCAAAGACACTATCTGAGGAGTTGTCAGCTTTTGAGATGAAATAT
TGTCAGACGCCATATCTGGAGGGGAGCTGGGATACTTCCATTGATACCTTTCTCAATGGTGATGCAACCCAGGATGGTTGTA
ACCCAGTGGATCTTTGGAGCTTTGATGACCTTCCTTCAATGTCTGGGGGAGTTTTCTAAGCGCACCAGCTTTTCAAGTTTAT
GTAAATAAAGCATGAAGGGTTTCGCCGGAGTGCAAGCAGTTGAATATGCTCAAGGCTTGTGTGGGGATATGTTAAGCTGTAG
CTGCTGGTCTATTGCTGCTGGTCTATTGGGGAGTATATAGGTATTAGGTCTACTTCTACCTTGAAAGACTTATTTTCGCTTG
CTAAACTTGTTTGTACCGATGTGATGGGAATGTGTGAGCCGTGATGATACTGAAACCTGATGATTGTGAACTTTGGTTTGTT
TTAATTTATTCAGGTCTTTTCTTATACAAGAGGCCCTCAAATTTTGCATATATA


RU05956 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
337300106

Probe ID Probe Sequeces
yueji_13476TTATTCTCAGCAGGCACAAGATCCTCAGGGTTTAGCCTTCAGTTTTCTTGGTTGGATTAG bl2seq
yueji_13584GAGCCGTGATGATACTGAAACCTGATGATTGTGAACTTTGGTTTGTTTTAATTTATTCAG bl2seq


RU05956 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAX07458 ethylene-responsive element binding protein ERF2 [Gossypium hirsutum] 1254 1e-135
AAC24587 AP2 domain containing protein [Prunus armeniaca] 1149 1e-123
AAX20013 putative ethylene responsive element binding protein [Gossypium hirsutum] 1123 1e-120
CAE54591 ethylene transcription factor [Fagus sylvatica] 1122 2e-120
AAT77192 ethylene response factor 1 [Gossypium barbadense] 980 6e-104

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9LUM4 Ethylene-responsive transcription factor RAP2-2 618 4e-063
Q9SSA8 Ethylene-responsive transcription factor RAP2-12 600 5e-061
Q6K7E6 Ethylene-responsive transcription factor 1 402 4e-038
O22259 Ethylene-responsive transcription factor ERF071 259 2e-021
P42736 Ethylene-responsive transcription factor RAP2-3 255 5e-021

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
C0J9I7 Ethylene responsive transcription factor 2a 1258 3e-136
Q3L0R1 Ethylene-responsive element binding protein ERF2 1080 1e-115
O81365 AP2 domain containing protein (Fragment) 998 4e-106
B9T4R8 Ethylene-responsive transcription factor, putative 997 6e-106
Q52QY1 Ethylene response factor 977 1e-103

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G14230.2 RAP2.2; DNA binding / transcription factor 625 6e-065
AT3G14230.3 RAP2.2; DNA binding / transcription factor 623 1e-064
AT3G14230.1 RAP2.2; DNA binding / transcription factor 618 4e-064
AT1G53910.1 RAP2.12; DNA binding / transcription factor 600 5e-062
AT1G53910.2 RAP2.12; DNA binding / transcription factor 600 5e-062