RU05995 sequence (716 bp)


Member Information
GTTTTTTTCACTCTTTGCACCCTCTTCCCCAGCACACAAAGAAAACTAGAAAGCTACAGAACTCGAACTCCAAGCGTTCTGG
TGAAGGAGGAGGAGGAGGATATATTTGTAATTTCAATGACTAGTACTGCTGCTATGGGTGGTGGTGTTAGGGAGGAGGATCG
GAAGTACAGCTTGATAAACTTCGAAGAGACGGAGCTGCGTCTAGGGTTGCCGGGTCCGCTGAAAGACGGCGACCAAGGCGTG
AAGAGCGGTAATGGGAAGAGAGGGTTTTTGGCAACGGTTGATTTGAAGCTCAACTTCTCGTCGGTAAATGATGATGAGCATC
GGTCAGCTGGAGATGGTCAGCTGGAGATCAAAAAGGAGAAGGAGGATGCTTCTGCTGCTCCTGCTCCACGTGCAAAGGCTCA
AGTTGTGGGTTGGCCACCCGTCCGATCCTTCCGAAAGAATATCGTGACCGTCCAAAAGAAAAGCACAGATCAGGATCAGGCT
GAAAAGACCGGCAGCACTAGTACTAGTGCAGCGTTTGTTAAAGTGAGCATGGATGGAGCCCCATATTTGCGCAAAGTCGACT
TGAAGTTGTACCAAAGCTACCAAGAGCTTTCTACTGCTCTAGGCAAAATGTTTAGCTCCTTCACTATTGGTAATTCTAAGAT
TTTACCTATACGTAACCTTTCACCCAACGTCATCCTTTCTTTGTTTACAAGTGGTAATTT


RU05995 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
23005

Probe ID Probe Sequeces
yueji_00613ATTTTACCTATACGTAACCTTTCACCCAACGTCATCCTTTCTTTGTTTACAAGTGGTAAT bl2seq
yueji_01953AAACATTTTGCCTAGAGCAGTAGAAAGCTCTTGGTAGCTTTGGTACAACTTCAAGTCGAC bl2seq
yueji_09618TCAGCCTGATCCTGATCTGTGCTTTTCTTTTGGACGGTCACGATATTCTTTCGGAAGGAT bl2seq
yueji_11811GTTCTGTAGCTTTCTAGTTTTCTTTGTGTGCTGGGGAAGAGGGTGCAAAGAGTGAAAAAA bl2seq


RU05995 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABK94241 unknown [Populus trichocarpa] 474 8e-046
AAM21317 auxin-regulated protein [Populus tremula x Populus tremuloides] 459 4e-044
ABH01143 auxin-regulated protein [Populus tomentosa] 448 8e-043
CAN72026 hypothetical protein [Vitis vinifera] 431 7e-041
CAO70656 unnamed protein product [Vitis vinifera] 429 1e-040

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O24407 Auxin-responsive protein IAA16 382 3e-036
Q38825 Auxin-responsive protein IAA7 340 2e-031
Q38832 Auxin-responsive protein IAA14 325 1e-029
P93830 Auxin-responsive protein IAA17 295 4e-026
P13089 Auxin-induced protein AUX28 281 1e-024

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9I5F9 Predicted protein 467 5e-045
A9PCY8 Predicted protein 448 8e-043
Q8LSK7 Auxin-regulated protein 433 4e-041
Q0PH24 Auxin-regulated protein 422 8e-040
A5B5G0 Putative uncharacterized protein 404 9e-038

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G04730.1 IAA16; transcription factor 382 3e-037
AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor 342 1e-032
AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor 342 1e-032
AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor 331 2e-031
AT1G04250.1 AXR3 (AUXIN RESISTANT 3); transcription factor 295 4e-027