Member Information |
GCACGAGCTTCCCCTAACGTCGTGTCCATATCCCCCTACTACTATTATTGCACTCAAAGCTAGCAAGCTAGAGAGAGAGAGA ACAACACAAACACAGAGAGTTTTAGAGAAGAAGCAGAGAGCTGTAGAGAGAGAAAGTATAGAGAGGCTGAGATGGAGACAGA GCTCAGGCTAGGGTTGCCCGGAGGAGGAGGAGGAGGTGGTGAAGGAGAAGATCAGGTGGTGGTGATGATGAGGAAGAGAGGC TTCTCTGAAACCGAGAGTGAGATCACTACTGATGATGAGAGCAGCACTTGTGTGGATTTGAAGCTGAAACTTTCTTCCAAGG ATGGTAGCAGCAGCACTAATGAAAAGTCCAAGAGCTTGATGATGAACAAGAACAAGGAGAAGAACATGGATCTTCCCGCCGA TCCGGCAAAGCCTCCGGCCAAGGCACAAGTAGTGGGTTGGCCGCCGGTGAGATCCTTCCGGAAGAACATGTTGAGCGCACAG AAGAGCAGTTCTACTGATGAAAGCAAGGCTGGAGGAAATGCAGCTTTGGTGAAGGTGAGCATGGATGGTGCGCCTTACCTCC GAAAGGTCGACCTGAACATGTACAAGACTTACCCTCAGCTCTCCGACGCCCTAGCCAAAATGTTCAGCTCGTTCACCATTGG TAACTGTGGATCCCAAGGAACGATTGATTTCATGAATGAGAGGAAGCTGATGGATCTTCTCAATGATTCTGATTACATCCCA ACTTATGAAGACAAGGACGGTGACTGGATGCTTGTTGGTGATGTCCCGTGGGAGATGTTTGTTGAATCATGCAAGAGACTGC GCATAATGAAGGGAAAGGAGGCTGTTGGACTCGCACCAAGAGCCATGGAGAAATGCAAGAACAGAAGCTGAAGAATTAGCGC AATGACTCTCCGCAGCCTGCTCCTTTGATCTCGTCGCGGTCGATCTATCGTCACACGGAGATGGATTGAGCAGGTTGTTTGG ATGCATCTTTGATTATTTTTCATGTAATATTTGTTTTCAAGGTTTGATATATGTAAGTAATTAAAGTGAGATACTTTTGGGT TCTTAGTTTTTATCTGGACATATTTGCATCTTAAGTATGTTTGAGGACTGCTTCGTCTTGCTTTTGTTTGGTCCTAATGGCT TGCTTAATAAGTACAATAATGTATGGACCGGTTAATAATTTGTGGTATTTAATGTTGTTTTTTATTTTTAAACCCTGAAATT ATTTCTTCGTTTATTTATATATATTTTGAAATCAAAAAAAA |
Digital Expression: |
Control | Ethylene | WDS | GenBank | Total |
---|---|---|---|---|
233 | 117 | 6 | 11 | 367 |
Probe ID | Probe Sequeces |
yueji_01598 | AAGTTGGGATGTAATCAGAATCATTGAGAAGATCCATCAGCTTCCTCTCATTCATGAAAT bl2seq |
yueji_06240 | ATCCAGTCACCGTCCTTGTCTTCATAAGTTGGGATGTAATCAGAATCATTGAGCTCGTGC bl2seq |
yueji_06282 | TTTCCTCCAGCCTTGCTTTCATCAGTAGAACTGCTCTTCTGTGCGCTCAACATGTTTTTC bl2seq |
yueji_11084 | AAGCCGTCCTCAAACATACTTAAGATGCAAATATGTCCAGATAAAAACTAAGAACCCAAA bl2seq |
yueji_11824 | ATGTTTGTTGAATCATGCAAGAGACTGCGCATAATGAAGGGAAAGGAGGCTGTTGGACTC bl2seq |
GenBank top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
AAD32146 | Nt-iaa28 deduced protein [Nicotiana tabacum] | 753 | 9e-078 |
CAN63268 | hypothetical protein [Vitis vinifera] | 730 | 4e-075 |
CAO71287 | unnamed protein product [Vitis vinifera] | 727 | 9e-075 |
CAO70656 | unnamed protein product [Vitis vinifera] | 724 | 2e-074 |
AAM96891 | auxin-responsive protein IAA1; MjAux/IAA1 [Mirabilis jalapa] | 696 | 4e-071 |
Swiss-Prot top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
P13089 | Auxin-induced protein AUX28 | 630 | 1e-064 |
Q38832 | Auxin-responsive protein IAA14 | 616 | 5e-063 |
P0C132 | Auxin-responsive protein IAA30 | 605 | 1e-061 |
P93830 | Auxin-responsive protein IAA17 | 572 | 6e-058 |
Q38825 | Auxin-responsive protein IAA7 | 552 | 1e-055 |
TrEMBL top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
B9GS70 | Predicted protein | 669 | 5e-068 |
A7QVQ0 | Chromosome chr14 scaffold_190, whole genome shotgun sequence | 668 | 6e-068 |
Q9XEY5 | Nt-iaa28 deduced protein | 657 | 1e-066 |
B8YIB9 | Auxin-responsive protein IAA1 (Fragment) | 653 | 3e-066 |
Q8L5G7 | Auxin-responsive protein IAA1 (Fragment) | 653 | 3e-066 |
Arabidopsis top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
AT4G14550.1 | IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | 617 | 4e-064 |
AT1G04250.1 | AXR3 (AUXIN RESISTANT 3); transcription factor | 573 | 5e-059 |
AT3G23050.1 | IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 553 | 1e-056 |
AT3G04730.1 | IAA16; transcription factor | 542 | 2e-055 |
AT5G65670.2 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor | 517 | 1e-052 |
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