RU06293 sequence (2107 bp)


Member Information
GCACGAGCACAAACACACTTGCCCCATTCTCGATCTGCATCTGGGTTTTTTTTTTCAGAACTCGGATTCCTTGCTGGTGCGA
TTTTTCTGAGAAGAAGAAGAAGAGGGAAAAGATTTTGGTGTTGGGTTTGTTCCGTTTGGGGTAAAACCCGGTTCGACGAGTT
GTAGACATCACGGCTATACACAGAGTTTCACGGCCGCTCATTCATGTCCGGACTGTCCGACGTAAGGGTTGTGTAATTGAGA
GCAACCCTTCGCCGCACGGCGGGCGTGGTGCTTTGCCGTCTGAAGGAGGAAGTCCTTCCGACCTCCTTTTCCTCGCCGGTGG
TGGTGTTCAGGCTTCCCACTTGCTTTTGTTTTTCTAGCTTTTTCTTCTTCTTAGTAGTTTCTGGTTTTAGCTGAAGATTGTT
GTTTCGAGATTTTCTGCAAGTAGATCCTGTTTGTTGTCGTTGGTGTGGTTTCATTTGATTAAAAAAAAAGAAAAAGAACAAA
AAAAAAATTGATGCTGAAGATCAAGAGGGTTCCTACTGTGGTTTCGAATTACCAGAAAGATGAGGCTGACGAGGGTCGCCGA
GCTGGGGGCTGTGGCCGCAACTGCCTCAACAAATGTTGCATTTCAGGAGCAAAACTTCCATTGTATGCTTTCAAGAAGCAAA
ACAACTCATCTGGTGACAAGGGATTTTCCGGACATGAGAAGCAAGAGGCTCCCGTTGCTTTTCTTGACTCATTACTTCTTGG
AGAGTGGGAGGATCGCATGCAGAAAGGGCTATTTCGATATGATGTCACTGCCTGCGAAACCAAGGTGATCCCGGGGCAGTTT
GGCTTCATTGCCCAGCTCAATGAGGGCCGCCACCTTAAGAAGCGACCAACCGAGTTTCGAGTTGACAAGGTTCTCCAACCTT
TTGATGGTAGCAAGTTCAACTTCACTAAAGTTGGCCAAGAGGAGGTTCTGTTCCAGTTTGAAGCGAGTGAAGATGGTGAAGT
TCAGTTTCATCCTAATGCACCTATTGATGTTGAAAATTCTCCAAGCGTTGTTGCCATCAATGTCAGTCCAATTGAATATGGG
CATGTGTTGTTGATTCCTCGTATTCTTGAGTCTTTGCCACAAAGGATTGATCGTGAAAGCTTCTTGCTTGCACTTCACATGG
CGGCAGAAGCAGGGAATCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCTACCATCAATCACCTTCACTTCCA
GGCTTACTACTTGGCTGTAACCTTTCCCATTGAAAAGGCTCCTACTAAGAAAATAACCACTTTGGATGTTGGGGTGAAGATC
TCTGAGCTTCTGAACTATCCTGTTAGAGGTCTAGTTCTTGAGGGTGGAAATACTCTGGAAGATTTGTCAAACTCTGTCTCTG
ATGCCTGCATTTGCCTTCAAGAGAACAACATTCCTTACAATGTCCTCATATCTGACTGTGGAAAGCGGATCTTTCTCTTGCC
ACAGTGTTATGCTGAGAAACAAGCTCTTGGGGAAGTTAGGGCAGAGCTTCTGGATACTCAGGTGAATCCAGCTGTGTGGGAA
ATTAGTGGACATATGGTGTTAAAGAGGAGGGAGGACTATGATGAGGCTTCTGATGAAAATGCTTGGAAGCTCCTGGCTGAGG
TCTCTCTTTCTGAAGAGAGGTTCCAAGAGGTGAACGCTCTTATATTTGGAGCCATTGCTTGTGGTGGCGATGATGGGAATGC
AAATTTACTAGAGGATCCAGATGTGAAGCCTCGCTCTCATGAAGAAGTCAATGCCATTAACAAAAGCTCTCGTCATGCTATA
GTGTCCGGAACTCAGGAATGCCTCGTTCTGCAGTAATGAGCAGATCAGTGGTTTTGTACCTGTGAATCTAGTATTGCAGTTT
GACATTTGGGTTTTATGTCTGTACCGTATTGGATGCTAGCCGATGCCTAAATAAGCAAAACTGGGTTTGCATAGTCAACTCT
ACTTTTGCAGTTTGTATGTTCCGCATAACGACTTTGATCTATTTGCTTAGGGTGCTTTATGGGTACTGTGTAAAATACTCTG
TAGAGATTGCTATTGTGGATGATCAATAAATGTCATGTTTATTAAATGAAAAAAAAA


RU06293 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
1009508203

Probe ID Probe Sequeces


RU06293 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABP65665 VTC2-like protein [Actinidia chinensis] 1878 6e-208
ABK96203 unknown [Populus trichocarpa] 1843 7e-204
CAO38909 unnamed protein product [Vitis vinifera] 1823 1e-201
CAN70988 hypothetical protein [Vitis vinifera] 1712 1e-188
AAL07213 unknown protein [Arabidopsis thaliana] 1628 6e-179

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q6ZNW5 UPF0580 protein C15orf58 423 2e-040
Q3TLS3 UPF0580 protein C15orf58 homolog 413 3e-039
Q8HXE4 UPF0580 protein C15orf58 homolog 406 2e-038
Q5E9T1 UPF0580 protein C15orf58 homolog 271 9e-023
Q08CA1 UPF0580 protein C15orf58 homolog 252 2e-020

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
C0LQ97 VTC2-like protein 1994 2e-221
A4ZRE3 VTC2-like protein 1850 1e-204
B9SWJ0 Putative uncharacterized protein 1840 1e-203
A9PIK0 Predicted protein 1816 9e-201
B9I155 Predicted protein 1814 1e-200

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G26850.1 VTC2 (vitamin c defective 2); GDP-D-glucose phosphorylase/ GDP-galactose:glucose-1-phosphate guanyltransferase/ GDP-galactose:mannose-1-phosphate guanyltransferase/ GDP-galactose:myoinositol-1-phosphate guanyltransferase/ galactose-1-phosphate guanylyltra 1614 2e-179
AT5G55120.1 VTC5 (VITAMIN C DEFECTIVE 5); GDP-D-glucose phosphorylase/ galactose-1-phosphate guanylyltransferase (GDP)/ quercetin 4'-O-glucosyltransferase 1569 3e-174