RU06952 sequence (949 bp)


Member Information
TTGAGCTATCCCACAACTGGAAAAGCGGTAGTGTCCACTTTGCTGGTTATCAATCCGTAATGGGAGATGAGGAATCGGATGA
TGAGTTTGAATCAGAGTCAGAAGAAGAGGAGGAAGAACTCCCAATGATTGCTGCAGAGAATGGAAAAGTTGAAAATGCAAAA
CCAGCTATAGCCAAGAGCAATGCTGTCAAACCTGAATCTTCTGGAAAGCAAAAGGTTAAGATTGAAGAACCAATCAAAGTTG
AGGCTGATGAAGATGATTCCGCTTCTGACATGGATGACTCAGATGACTTATTGGATGAAGATGACTCATCAGAGGATGATGA
TGATGAAAGTGAGGATGATTCTGATGAGGAAGATGAAGAGACACCTACTCCTAAGAAGCCTGAATACTAAAAAAAGAGCCCA
GGTCTCTGGATCAGTCAAAACTCCAGTTTCTGCTAAGAAGGCGAAGATAGTCGCCAGTACTCCTCAGAAGACTGATGGTAAG
AAGGGTGGCCACACAGATACTCCACACCCTGCAAAGAAGGGAAAGACTCCTGCTACCGATAAATCCAAGACACAAACTCCAA
AGTCTGCTGGTGGCAATTTCTCCTGCGGTTCCTGCAGCAAGTCATTTGGTTCAGATGGTGCTCTTCAGTCTCACAACAAGGC
TAAGCATAGTGCTGGAAAGTAGAATGGAAATGTGGCTGAAGCGCAGCTTGTTTTTGATATATAGTAATTTTGGAATCGAGAG
TACAGGTTGAAGGGTTTTGACATATTGCCCTCGGGATTTATTTATCGCCTTGTTTTGTTCGACATTTAACTGGATGGTTTAG
TGTGCTACTTTGGATTGTTTCTCTTAATTATTAATTAGGCGTTATATTTAAATCCCTATTTCTTTTTATCATTATTCTACTT
TTAATTGGTATTTTAAGTCAACTTGGGTGTCTAGTTTGAAAAAAAAA


RU06952 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
45009

Probe ID Probe Sequeces
yueji_06255ATTCCTCATCTCCCATTACGGATTGATAACCAGCAAAGTGGACACTACCGCTTTTCCAGT bl2seq


RU06952 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_001105402 nucleolar histone deacetylase HD2-p39 [Zea mays] 238 3e-018
XP_001477240 PREDICTED: hypothetical protein [Mus musculus] 176 5e-011
AAQ82687 Epa5p [Candida glabrata] 171 2e-010
XP_001379356 PREDICTED: hypothetical protein [Monodelphis domestica] 171 2e-010
XP_001117357 PREDICTED: hypothetical protein, partial [Macaca mulatta] 169 3e-010

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9M4U5 Histone deacetylase HDT2 163 1e-010
Q9M4U4 Histone deacetylase HDT3 160 3e-010
Q8LJS2 Histone deacetylase HDT1 155 1e-009
O24591 Histone deacetylase HDT1 152 2e-009
Q56WH4 Histone deacetylase HDT2 144 2e-008

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9SN80 Histone deacetylase 2a, putative 206 1e-014
B8AXI7 Putative uncharacterized protein 192 6e-013
Q0DFD6 Os05g0597100 protein 192 6e-013
Q5KQG2 Putative histone deacetylase HD2 192 6e-013
Q688F7 Putative histone deacetylase HD2 192 6e-013

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase 156 7e-011
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding 151 3e-010
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase 144 2e-009