Member Information |
| CATCAGTGTCATCAACAATCTTGGTCAATTGTTCCCGACACAATGTGCTCTTCTTATGTAGCTGCTGCTGCTCTTTGCTTAA ATTAGAAGACCCCATTAGATTTTGCATTAGCATAATCCCACTTAGAGGCTTTTTGATTTCTTGACGAATATAGGCCACTTTC CTAAGACTATCAGCTGCAGCCTGCTCTGCTATTCTTTGCACCTGCATAGCATACTGAAGCTCTGGACTAGCAACATATATAA AGCACAATACCCCAGTTATCCTTCCTTCTTCATCACTTCTCTTGTTAGCAGAA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 1 | 3 | 0 | 0 | 4 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO41164 | unnamed protein product [Vitis vinifera] | 376 | 5e-035 |
| AAC49301 | phytochrome F [Lycopersicon esculentum] | 343 | 3e-031 |
| Q40762 | Phytochrome | 303 | 1e-026 |
| NP_198433 | PHYC (PHYTOCHROME DEFECTIVE C) [Arabidopsis thaliana] | 297 | 7e-026 |
| CAA83549 | phyC [Arabidopsis thaliana] | 297 | 7e-026 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q40762 | Phytochrome | 303 | 9e-028 |
| P14714 | Phytochrome C | 297 | 5e-027 |
| A2XM23 | Phytochrome C | 292 | 2e-026 |
| Q10CQ8 | Phytochrome C | 292 | 2e-026 |
| P93528 | Phytochrome C | 272 | 4e-024 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7Q305 | Chromosome chr12 scaffold_47, whole genome shotgun sequence | 376 | 5e-035 |
| B9U4G8 | Phytochrome C | 376 | 5e-035 |
| B9U4G4 | Phytochrome C | 374 | 8e-035 |
| Q41335 | Phytochrome F | 343 | 3e-031 |
| Q15ED8 | PHYTOCHROME C (Fragment) | 297 | 7e-026 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT5G35840.1 | PHYC (phytochrome defective c); protein histidine kinase | 297 | 4e-028 |
| AT1G09570.1 | PHYA (PHYTOCHROME A); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer | 244 | 5e-022 |
| AT1G09570.2 | PHYA (PHYTOCHROME A); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer | 244 | 5e-022 |
| AT2G18790.1 | PHYB (PHYTOCHROME B); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer | 206 | 1e-017 |
| AT4G16250.1 | PHYD (PHYTOCHROME DEFECTIVE D); G-protein coupled photoreceptor/ red or far-red light photoreceptor/ signal transducer | 204 | 2e-017 |
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