RU08013 sequence (494 bp)


Member Information
GCACGAGGTTTTTCGTTGATCGAGATGTGTTCTTATTCTTGATGCCTGGTGATCTTGGTGTGAAGTATTTGATCAAGCTGTT
ACAGGTTGAGTAGTGGGGAAGTTTAGTTTGGGTAGTGCAGAAGGAAAAGCAGATCTTTTGTTTGCCAAGATGAAGTTTATGA
AACTTGGATCAAATCCTGATTCCTTTCAGACTGATGGCAATAATGTTAGGTATGTGGCAGCTGATTTGGAAACAGATATCAT
CGTTAATGTTGGAGTTTCAAAGTTTTATCTACACAAGTTTCCTCTTCTATCGAAGAGTGGCCGCTTACAGAAATTAGCAAAC
ACCAATGAGTCGAAACCTTTGGAAATTCACATTTCAGACATTCCTGGTGGCCCTGCTGCATTTGAGATATGTGCCAAGTTCT
GTTATGGCATGACTGTCACCCTGAATGCTTACAATGTTGTTGTGTGTCGATGTGCGGCTGAGTATATGGGAATGCACGAGTC
TA


RU08013 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01023

Probe ID Probe Sequeces


RU08013 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_001049315 Os03g0205700 [Oryza sativa (japonica cultivar-group)] 419 7e-040
ABF94544 transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] 419 7e-040
EAY88962 hypothetical protein OsI_010195 [Oryza sativa (indica cultivar-group)] 419 7e-040
EAZ25986 hypothetical protein OsJ_009469 [Oryza sativa (japonica cultivar-group)] 419 7e-040
ACG43260 unknown [Zea mays] 404 4e-038

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9S9Q9 BTB/POZ domain-containing protein At1g30440 252 2e-021
Q9FMF5 Root phototropism protein 3 243 2e-020
Q682S0 Root phototropism protein 2 206 3e-016
Q9FKB6 BTB/POZ domain-containing protein At5g48800 184 1e-013
Q5KS50 Coleoptile phototropism protein 1 127 5e-007

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7QL55 Chromosome chr3 scaffold_117, whole genome shotgun sequence 472 5e-046
B9SGZ1 Signal transducer, putative 471 6e-046
A7PLP6 Chromosome chr7 scaffold_20, whole genome shotgun sequence 459 2e-044
B9GI83 Predicted protein (Fragment) 446 5e-043
B9HMY5 Predicted protein 442 1e-042

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G67440.1 NPY3 (NAKED PINS IN YUC MUTANTS 3); protein binding / signal transducer 407 2e-040
AT2G14820.1 NPY2 (NAKED PINS IN YUC MUTANTS 2); protein binding / signal transducer 389 2e-038
AT2G23050.1 NPY4 (NAKED PINS IN YUC MUTANTS 4); protein binding / signal transducer 379 3e-037
AT4G31820.1 ENP (ENHANCER OF PINOID); protein binding / signal transducer 373 2e-036
AT3G26490.1 phototropic-responsive NPH3 family protein 295 2e-027