RU08436 sequence (442 bp)


Member Information
CCCTCATCAACGTCATCGTCTCCTCCCGTTTCCTCCAAGAGAATTCGCTTTTCTTCTTCTTCTTCTCCAGTACGCTTCTCCC
CTCCCACGACGACGTCGTTTGGTTCGTCCTTCATCGACCAGCTCAGGGCCCTTTTCCCGGACATGGATAACCAGCTTCTGGA
GAGAGCACTTGAAGAATGCGGTAATGATTTGGATTCAGCTATCAGAAGTTTGAATGAGCTGCGCTTAAGTTCTGCTGCAAAT
AAATCCGGTGTAGCATCAGAAGCAAATGTGCAACCCCAGGCACAAGGTGCAGTAGCAACAAATGGAGAAGTTTCTGGTAATG
ATGATCGATCAGGACAAAATAACCTGCCCACGCAAGGAGCCGATTGGGTGGAGCTCTTTGTTAGAGAGATGATGAGTGCCTC
CAACATGGATGATGCTAAAGCCCGTGCTTCAA


RU08436 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
1130014

Probe ID Probe Sequeces
yueji_06876TCTTTGTTAGAGAGATGATGAGTGCCTCCAACATGGATGATGCTAAAGCCCGTGCTTCAA bl2seq


RU08436 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO65714 unnamed protein product [Vitis vinifera] 395 3e-037
ABK93674 unknown [Populus trichocarpa] 340 6e-031
NP_568521 unknown protein [Arabidopsis thaliana] 334 3e-030
AAK43955 unknown protein [Arabidopsis thaliana] 334 3e-030
ABK95835 unknown [Populus trichocarpa] 332 5e-030

Swiss-Prot top hits
Accession No. Description Score e value
no blast result!

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7PF87 Chromosome chr11 scaffold_13, whole genome shotgun sequence 344 2e-031
A9PBC1 Putative uncharacterized protein 323 5e-029
B9SME8 Putative uncharacterized protein 320 1e-028
A9PHI2 Putative uncharacterized protein 303 1e-026
B9HA90 Predicted protein (Fragment) 292 2e-025

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G32440.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). 275 3e-025
AT5G32440.2 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 275 3e-025
AT1G80040.1 unknown protein 111 3e-006
AT1G80040.2 unknown protein 111 3e-006