RU09061 sequence (822 bp)


Member Information
GGAAACAGATCAACTTCTTCAGTCACAGAGGTTTAGGGCAGCCATTTCTAGGGTTAGGGTTTTGCCGAGAAAAGCAAGAAGA
AGAAGAAGGATCTCATAATGTCGCAGTACGGAATACAATCAATGCTGAAGGAGGGGCACAAGCACCTCTCCGGTTTGGACGA
AGCGGTGGTCAAGAACATCGAGGCCTGCAAGCAACTCTCCACCATCATTCGCACTTCTCTCGGTCCCAACGGCATGAATAAG
ATGGTAATCAATCACTTAGATAAGCTCTTTGTCACAAATGATGGTGCCACCATTGTTAATGAACTCGAGGTTCAGCACCCTG
CCGCCAAGCTTTTGGTTTTGGCAGGCAAGGCTCAACAGGAGGAGATTGGCGATGGTGCTAATCTCACCATTTCGTTCGCCGG
AGAACTGCTTTCGCATGCCGAGGAGCTTATCAGGATGGGCTTGCACCCCAGTGAGATCATTAGTGGATACACGAAAGCAATT
AAGAAGACAATTGAAATCTTGGAAGAACTGGTTGAGGAAGGTTCTGAGACTATGGACGTGCGTAATAAAGAACAAGTGGTTA
ANAGAATGAAAGCGCCTGTCGCCAGNCAGCAGTTTGGACAAGAAGAGATATTGTCCTCACTTGTTGCCGATGCATGTATACA
AGTATGCCCCAAGAACCCGGNCAACTTTAATGTGGATAATGTACGAGTGGCAAAGTTCTTGGGAGGGGGTTTGCATAATTGT
ACTGTAGTTCGAGGTATGGCATTTAAGACTGATGCTGTTGGCAGCATAAGAAAATGCAGAAGGCCAAGGTTGCTGTGTTTGC
TG


RU09061 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
20013

Probe ID Probe Sequeces
yueji_04139AAACCCTAACCCTAGAAATGGCTGCCCTAAACCTCTGTGACTGAAGGAGTTGATCTGTTT bl2seq


RU09061 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO23487 unnamed protein product [Vitis vinifera] 1029 4e-110
NP_566219 chaperonin, putative [Arabidopsis thaliana] 1000 1e-106
AAF05855 putative T-complex protein 1, theta subunit (TCP-1-Theta) [Arabidopsis thaliana] 1000 1e-106
NP_001051623 Os03g0804800 [Oryza sativa (japonica cultivar-group)] 986 4e-105
EAY92246 hypothetical protein OsI_013479 [Oryza sativa (indica cultivar-group)] 986 4e-105

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q552J0 T-complex protein 1 subunit theta 593 1e-060
Q3ZCI9 T-complex protein 1 subunit theta 559 1e-056
Q9N358 T-complex protein 1 subunit theta 554 4e-056
P42932 T-complex protein 1 subunit theta 554 4e-056
Q4R5J0 T-complex protein 1 subunit theta 552 7e-056

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7PW56 Chromosome chr8 scaffold_34, whole genome shotgun sequence 927 3e-098
B9SHG6 Chaperonin containing t-complex protein 1, theta subunit, tcpq, putative 907 6e-096
Q94K05 At3g03960 902 2e-095
Q9SQR6 Putative T-complex protein 1, theta subunit (TCP-1-Theta) 902 2e-095
A9PG05 Putative uncharacterized protein 886 2e-093

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G03960.1 chaperonin, putative 902 2e-097
AT3G20050.1 ATTCP-1; ATP binding / protein binding / unfolded protein binding 272 2e-024
AT3G11830.1 chaperonin, putative 270 4e-024
AT3G18190.1 chaperonin, putative 259 7e-023
AT5G26360.1 chaperonin, putative 251 6e-022