RU09203 sequence (779 bp)


Member Information
GATGCATTTTTTCTTTATTTTTGGCTGATAATGATAAAGATATCCAATGGCATGATTCTTTTGTTGGTAGATTGGAGGATTA
GAAACATGACTATTGCTTTCCAGTTGGCTGTTTTTGCATTAATTGCTACTTCATTAATCTTATTGATTAGTGTACCTGTTGT
ATTTGCTTCTCCTGAGGGTTGGTCGGGTAACAAAAATGTTGTATTTTCCGGTACATCATTGTGGATTGGATTAGTCTTTCTG
GTGGGTATCCTTAATTCTCTCATCTCTTGAACCTATTCGTTCTAGATCCAAAAATGAAATGACCCCTCCCTCCGAATTCCTT
CAGGTTGTGAGACACATTAAAATTCAATATAAGTCCCAAAAATGCAAATAACGAAAAAGAAAAAATTAGAAAAATTAAAAAT
AGAGGGAGGGGACAAACTTTTGTGTATTTGTATTGTAAAAATATGTAAAAATGGAAAATAATAAAATTGAAATAAAAAATAT
ACTAAATACATATTTAGTTATTAAGTATTTATTATAAGACGTTTTGAAATAAGAATTATCTAAATATTATATAAATTCGAAA
ATTATATAAAATAAAAAGAAATAATATAAATATATATATATAAATATATATATAATTATATATAATGCGGATATGGTCGAAT
GGTAAAATTTCTCTTTGCCAAGGAGAAGATGCGGGTTCGATTCCCCGCTATCCGCCCAGGATAATGGGTAAATATATGAAAT
TCAATCTATTTTATTTATATTTAATAGATAAAGCATTAATT


RU09203 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
380415

Probe ID Probe Sequeces
yueji_03189AGCCAACTGGAAAGCAATAGTCATGTTTCTAATCCTCCAATCTACCAACAAAAGAATTAT bl2seq


RU09203 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
YP_001109497 hypothetical protein Poptr_cp018 [Populus trichocarpa] 372 6e-034
Q9MTN4 Uncharacterized 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) 343 1e-030
T08999 hypothetical protein - spinach chloroplast 313 4e-027
AAA79707 ORF 62 308 2e-026
AAW56530 PsbZ [Prunus hortulana] 301 1e-025

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q4VZN6 Photosystem II reaction center protein Z 242 6e-020
Q9MTN5 Photosystem II reaction center protein Z 240 1e-019
Q2PMU0 Photosystem II reaction center protein Z 238 2e-019
Q09MI1 Photosystem II reaction center protein Z 237 2e-019
Q06FV9 Photosystem II reaction center protein Z 237 2e-019

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A4GYQ6 Putative uncharacterized protein 372 6e-034
Q6Z1U6 Putative Hooker's evening primrose chloroplast hypothetical 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) 284 9e-024
B9HQ74 Predicted protein 275 1e-022
A9U6P2 Predicted protein 273 2e-022
A4QM94 ORF83b 265 1e-021

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
ATCG00300.1 encodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II. 237 2e-020