RU09616 sequence (324 bp)


Member Information
ATATAGACGGTGCTCGTGAGCTACATAGTTTGATGGACTGATCACACAGCCGCCATGGGTGCACCTGAAACAAGCCTTATGG
TATGATGTTCCATCAACTCCCACCTTTTCAGTTGGGTAAACTGTTTTCTTGCAAGCAACACACTTTTCTTGAGTTCCAGCAA
ACATACTGGAAACTTTGCTATTGACCTGATCAGCAGACCTGTCTCTCACAGTTTTCGGGTTACCTTCAAAACTTTTATCCAA
GCTGCCAGTCATCTTAAATAGCTGATCAAAGTGAGGCTTACAATATAAAACACCCTCGAACGAGGAATAATTACTAAG


RU09616 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
03003

Probe ID Probe Sequeces
yueji_06754AAATAGCTGATCAAAGTGAGGCTTACAATATAAAACACCCTCGAACGAGGAATAATTACT bl2seq


RU09616 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO64386 unnamed protein product [Vitis vinifera] 536 1e-053
ACB05475 LIM domain protein 2b [Nicotiana tabacum] 338 1e-030
NP_001047550 Os02g0641000 [Oryza sativa (japonica cultivar-group)] 332 6e-030
NP_191682 LIM domain-containing protein [Arabidopsis thaliana] 329 1e-029
NP_001132843 hypothetical protein LOC100194335 [Zea mays] 324 5e-029

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P29675 Pollen-specific protein SF3 388 1e-037
Q4U4S6 Xin actin-binding repeat-containing protein 2 133 5e-008
Q4U0T9 Cysteine and glycine-rich protein 3 124 5e-007
P50462 Cysteine and glycine-rich protein 3 123 7e-007
Q8BGB5 LIM domain-containing protein 2 121 1e-006

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7PD59 Chromosome chr17 scaffold_12, whole genome shotgun sequence 536 1e-053
B9IEM9 Predicted protein 518 2e-051
B9RB75 Pollen-specific protein SF3, putative 513 6e-051
Q56R05 Putative pollen specific LIM domain-containing protein 512 8e-051
B9I367 Predicted protein 502 1e-049

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G10200.1 WLIM1; transcription factor/ zinc ion binding 417 5e-042
AT2G39900.1 LIM domain-containing protein 353 1e-034
AT3G55770.1 LIM domain-containing protein 347 6e-034
AT3G55770.2 LIM domain-containing protein 347 6e-034
AT3G55770.3 LIM domain-containing protein 347 6e-034